activity
20152022
most citedAligning 415 519 proteins in less than two hours on PC

245 citations · 333 across the 5 of their papers we have counts for

collaborators

5 papers

cs.DB2022

Separate and conquer heuristic allows robust mining of contrast sets in classification, regression, and survival data

Adam Gudyś, Marek Sikora, Łukasz Wróbel

Identifying differences between groups is one of the most important knowledge discovery problems. The procedure, also known as contrast sets mining, is applied in a wide range of a…

cs.LG2019★ 32 cited

RuleKit: A Comprehensive Suite for Rule-Based Learning

Adam Gudyś, Marek Sikora, Łukasz Wróbel

Rule-based models are often used for data analysis as they combine interpretability with predictive power. We present RuleKit, a versatile tool for rule learning. Based on a sequen…

cs.LG2018★ 40 cited

GuideR: a guided separate-and-conquer rule learning in classification, regression, and survival settings

Marek Sikora, Łukasz Wróbel, Adam Gudyś

This article presents GuideR, a user-guided rule induction algorithm, which overcomes the largest limitation of the existing methods-the lack of the possibility to introduce user's…

q-bio.GN2016★ 245 cited

Aligning 415 519 proteins in less than two hours on PC

Sebastin Deorowicz, Agnieszka Debudaj-Grabysz, Adam Gudys

Rapid development of modern sequencing platforms enabled an unprecedented growth of protein families databases. The abundance of sets composed of hundreds of thousands sequences is…

q-bio.QM2015★ 16 cited

QuickProbs 2: towards rapid construction of high-quality alignments of large protein families

Adam Gudys, Sebastian Deorowicz

Increasing size of sequence databases caused by the development of high throughput sequencing, poses multiple alignment algorithms to face one of the greatest challenges yet. As we…