307 citations · 381 across the 8 of their papers we have counts for
8 papers
Nullstrap: A Simple, High-Power, and Fast Framework for FDR Control in Variable Selection for Diverse High-Dimensional Models
Changhu Wang, Ziheng Zhang, Jingyi Jessica Li
Balancing false discovery rate (FDR) control with high statistical power remains a central challenge in high-dimensional variable selection. While several FDR-controlling methods h…
Question-Score Identity Detection (Q-SID): A Statistical Algorithm to Detect Collusion Groups with Error Quantification from Exam Question Scores
Guanao Yan, Jingyi Jessica Li, Mark D. Biggin
Collusion between students in online exams is a major problem that undermines the integrity of the exam results. Although there exist methods that use exam data to identify pairs o…
Protocol for Executing and Benchmarking Eight Computational Doublet-Detection Methods in Single-Cell RNA Sequencing Data Analysis
Nan Miles Xi, Jingyi Jessica Li
The existence of doublets is a key confounder in single-cell RNA sequencing (scRNA-seq) data analysis. Computational methods have been developed for detecting doublets from scRNA-s…
Issues arising from benchmarking single-cell RNA sequencing imputation methods
Wei Vivian Li, Jingyi Jessica Li
On June 25th, 2018, Huang et al. published a computational method SAVER on Nature Methods for imputing dropout gene expression levels in single cell RNA sequencing (scRNA-seq) data…
Modeling and analysis of RNA-seq data: a review from a statistical perspective
Wei Vivian Li, Jingyi Jessica Li
Background: Since the invention of next-generation RNA sequencing (RNA-seq) technologies, they have become a powerful tool to study the presence and quantity of RNA molecules in bi…
Hybrid statistical and mechanistic mathematical model guides mobile health intervention for chronic pain
Sara M. Clifton, Chaeryon Kang, Jingyi Jessica Li +3
Nearly a quarter of visits to the Emergency Department are for conditions that could have been managed via outpatient treatment; improvements that allow patients to quickly recogni…
TROM: A Testing-based Method for Finding Transcriptomic Similarity of Biological Samples
Wei Vivian Li, Yiling Chen, Jingyi Jessica Li
Comparative transcriptomics has gained increasing popularity in genomic research thanks to the development of high-throughput technologies including microarray and next-generation…
System Wide Analyses have Underestimated Protein Abundances and the Importance of Transcription in Mammals
Jingyi Jessica Li, Peter J. Bickel, Mark D. Biggin
Large scale surveys in mammalian tissue culture cells suggest that the protein expressed at the median abundance is present at 8,000 - 16,000 molecules per cell and that difference…