activity
20192024
most citedSelf-Referencing Embedded Strings (SELFIES): A 100% robust molecular string representation

663 citations · 1.5k across the 9 of their papers we have counts for

collaborators

10 papers

quant-ph2024★ 9 cited

Quantum Computing-Enhanced Algorithm Unveils Novel Inhibitors for KRAS

Mohammad Ghazi Vakili, Christoph Gorgulla, AkshatKumar Nigam +19

The discovery of small molecules with therapeutic potential is a long-standing challenge in chemistry and biology. Researchers have increasingly leveraged novel computational techn…

physics.chem-ph2023★ 25 cited

Recent advances in the Self-Referencing Embedding Strings (SELFIES) library

Alston Lo, Robert Pollice, AkshatKumar Nigam +3

String-based molecular representations play a crucial role in cheminformatics applications, and with the growing success of deep learning in chemistry, have been readily adopted in…

cs.CE2022★ 28 cited

Tartarus: A Benchmarking Platform for Realistic And Practical Inverse Molecular Design

AkshatKumar Nigam, Robert Pollice, Gary Tom +5

The efficient exploration of chemical space to design molecules with intended properties enables the accelerated discovery of drugs, materials, and catalysts, and is one of the mos…

cs.CY2022★ 383 cited

On scientific understanding with artificial intelligence

Mario Krenn, Robert Pollice, Si Yue Guo +9

Imagine an oracle that correctly predicts the outcome of every particle physics experiment, the products of every chemical reaction, or the function of every protein. Such an oracl…

physics.chem-ph2022★ 292 cited

SELFIES and the future of molecular string representations

Mario Krenn, Qianxiang Ai, Senja Barthel +28

Artificial intelligence (AI) and machine learning (ML) are expanding in popularity for broad applications to challenging tasks in chemistry and materials science. Examples include…

cs.NE2021★ 20 cited

JANUS: Parallel Tempered Genetic Algorithm Guided by Deep Neural Networks for Inverse Molecular Design

AkshatKumar Nigam, Robert Pollice, Alan Aspuru-Guzik

Inverse molecular design, i.e., designing molecules with specific target properties, can be posed as an optimization problem. High-dimensional optimization tasks in the natural sci…

cs.LG2021

Assigning Confidence to Molecular Property Prediction

AkshatKumar Nigam, Robert Pollice, Matthew F. D. Hurley +6

Introduction: Computational modeling has rapidly advanced over the last decades, especially to predict molecular properties for chemistry, material science and drug design. Recentl…

cs.LG2020★ 20 cited

Curiosity in exploring chemical space: Intrinsic rewards for deep molecular reinforcement learning

Luca A. Thiede, Mario Krenn, AkshatKumar Nigam +1

Computer-aided design of molecules has the potential to disrupt the field of drug and material discovery. Machine learning, and deep learning, in particular, have been topics where…

cs.NE2019★ 96 cited

Augmenting Genetic Algorithms with Deep Neural Networks for Exploring the Chemical Space

AkshatKumar Nigam, Pascal Friederich, Mario Krenn +1

Challenges in natural sciences can often be phrased as optimization problems. Machine learning techniques have recently been applied to solve such problems. One example in chemistr…

cs.LG2019★ 663 cited

Self-Referencing Embedded Strings (SELFIES): A 100% robust molecular string representation

Mario Krenn, Florian Häse, AkshatKumar Nigam +2

The discovery of novel materials and functional molecules can help to solve some of society's most urgent challenges, ranging from efficient energy harvesting and storage to uncove…