activity
20192026
most citedDeep Graph Library: A Graph-Centric, Highly-Performant Package for Graph Neural Networks

718 citations · 981 across the 17 of their papers we have counts for

collaborators

18 papers

cs.CL2026

KVEraser: Learning to Steer KV Cache for Efficient Localized Context Erasing

Mufei Li, Shikun Liu, Dongqi Fu +5

Post-hoc context erasing over the KV cache is challenging because a local edit has a global consequence: once a span has been processed, its influence propagates into the cached st…

cs.AI2026

Towards Direct Latent-Space Synthesis for Parallel Branches in LLM-Agent Workflows

Shikun Liu, Mufei Li, Dongqi Fu +5

Large language models increasingly serve as execution engines for agentic systems, yet they still consume context through a sequential text interface. This creates a mismatch with…

cs.SI2026

Can LLM Agents Simulate Dynamic Networks? A Case Study on Email Networks with Phishing Synthesis

Siqi Miao, Ziyang Chen, Yuhong Luo +4

While Large Language Model (LLM) multi-agent systems (MAS) offer a transformative approach to simulating human behavior in complex systems, it remains largely unexplored whether th…

cs.AI2026

On Information Self-Locking in Reinforcement Learning for Active Reasoning of LLM agents

Deyu Zou, Yongqiang Chen, Fan Feng +4

Reinforcement learning (RL) has become a de facto paradigm for building LLM-based agents that act, interact, and reason over extended task horizons. However, in active reasoning wh…

cs.CL2025

Haystack Engineering: Context Engineering for Heterogeneous and Agentic Long-Context Evaluation

Mufei Li, Dongqi Fu, Limei Wang +10

Modern long-context large language models (LLMs) perform well on synthetic "needle-in-a-haystack" (NIAH) benchmarks, but such tests overlook how noisy contexts arise from biased re…

cs.LG2025

Struc-EMB: The Potential of Structure-Aware Encoding in Language Embeddings

Shikun Liu, Haoyu Wang, Mufei Li +1

Text embeddings from Large Language Models (LLMs) have become foundational for numerous applications. However, these models typically operate on raw text, overlooking the rich stru…

cs.AI2025

Reducing Belief Deviation in Reinforcement Learning for Active Reasoning

Deyu Zou, Yongqiang Chen, Jianxiang Wang +5

Active reasoning requires large language model (LLM) agents to interact with external sources and strategically gather information to solve problems in multiple turns. Central to t…

cs.CR2025

Measuring Physical-World Privacy Awareness of Large Language Models: An Evaluation Benchmark

Xinjie Shen, Mufei Li, Pan Li

The deployment of Large Language Models (LLMs) in embodied agents creates an urgent need to measure their privacy awareness in the physical world. Existing evaluation methods, howe…

cs.CL2025

Weak-to-Strong GraphRAG: Aligning Weak Retrievers with Large Language Models for Graph-based Retrieval Augmented Generation

Deyu Zou, Yongqiang Chen, Mufei Li +5

Graph-based retrieval-augmented generation (RAG) enables large language models (LLMs) to ground responses with structured external knowledge from up-to-date knowledge graphs (KGs)…

cs.LG2025

Graph-KV: Breaking Sequence via Injecting Structural Biases into Large Language Models

Haoyu Wang, Peihao Wang, Mufei Li +4

Modern large language models (LLMs) are inherently auto-regressive, requiring input to be serialized into flat sequences regardless of their structural dependencies. This serializa…

cs.LG2024★ 1 cited

Underestimated Privacy Risks for Minority Populations in Large Language Model Unlearning

Rongzhe Wei, Mufei Li, Mohsen Ghassemi +7

Large Language Models (LLMs) embed sensitive, human-generated data, prompting the need for unlearning methods. Although certified unlearning offers strong privacy guarantees, its r…

cs.LG2024

LayerDAG: A Layerwise Autoregressive Diffusion Model for Directed Acyclic Graph Generation

Mufei Li, Viraj Shitole, Eli Chien +6

Directed acyclic graphs (DAGs) serve as crucial data representations in domains such as hardware synthesis and compiler/program optimization for computing systems. DAG generative m…

cs.CL2024★ 5 cited

Simple Is Effective: The Roles of Graphs and Large Language Models in Knowledge-Graph-Based Retrieval-Augmented Generation

Mufei Li, Siqi Miao, Pan Li

Large Language Models (LLMs) demonstrate strong reasoning abilities but face limitations such as hallucinations and outdated knowledge. Knowledge Graph (KG)-based Retrieval-Augment…

cs.AI2024★ 1 cited

KGExplainer: Towards Exploring Connected Subgraph Explanations for Knowledge Graph Completion

Tengfei Ma, Xiang song, Wen Tao +6

Knowledge graph completion (KGC) aims to alleviate the inherent incompleteness of knowledge graphs (KGs), which is a critical task for various applications, such as recommendations…

cs.LG2023★ 1 cited

GraphMaker: Can Diffusion Models Generate Large Attributed Graphs?

Mufei Li, Eleonora Kreačić, Vamsi K. Potluru +1

Large-scale graphs with node attributes are increasingly common in various real-world applications. Creating synthetic, attribute-rich graphs that mirror real-world examples is cru…

q-bio.QM2021★ 33 cited

Benchmarking Accuracy and Generalizability of Four Graph Neural Networks Using Large In Vitro ADME Datasets from Different Chemical Spaces

Fabio Broccatelli, Richard Trager, Michael Reutlinger +2

In this work, we benchmark a variety of single- and multi-task graph neural network (GNN) models against lower-bar and higher-bar traditional machine learning approaches employing…

cs.LG2021★ 222 cited

DGL-LifeSci: An Open-Source Toolkit for Deep Learning on Graphs in Life Science

Mufei Li, Jinjing Zhou, Jiajing Hu +4

Graph neural networks (GNNs) constitute a class of deep learning methods for graph data. They have wide applications in chemistry and biology, such as molecular property prediction…

cs.LG2019★ 718 cited

Deep Graph Library: A Graph-Centric, Highly-Performant Package for Graph Neural Networks

Minjie Wang, Da Zheng, Zihao Ye +12

Advancing research in the emerging field of deep graph learning requires new tools to support tensor computation over graphs. In this paper, we present the design principles and im…