activity
20192026
most citedBioDynaMo: a general platform for scalable agent-based simulation

54 citations · 61 across the 5 of their papers we have counts for

collaborators

6 papers

physics.plasm-ph2026

Electrohydrodynamic coupling and stochastic branching in a miniaturized ns-pulsed He plasma jet

Y Agha, K Giotis, D Stefas +7

This study focuses on the complex coupling between discharge and flow properties in a ns-pulsed He micrometer scale atmospheric pressure plasma jet (APPJ). This is investigated…

physics.comp-ph2025

RePlaChem: A dimensionality reduction library for plasma chemical mechanisms

Z. Nikolaou, E. Morais, S. Van Rompaey +3

In this work, we present RePlaChem, a software library for reducing detailed large-scale plasma chemical mechanisms to smaller skeletal ones. The library parses a plasma chemical m…

q-bio.TO2023

Recipes for calibration and validation of agent-based models in cancer biomedicine

Nicolò Cogno, Cristian Axenie, Roman Bauer +1

Computational models and simulations are not just appealing because of their intrinsic characteristics across spatiotemporal scales, scalability, and predictive power, but also bec…

math.NA2022

Displacement and pressure reconstruction from magnetic resonance elastography images: application to an in silico brain model

Felipe Galarce, Karsten Tabelown, Jörg Polzehl +5

Magnetic resonance elastography is a motion-sensitive image modality that allows to measure in vivo tissue displacement fields in response to mechanical excitations. This paper inv…

cs.CE2020★ 54 cited

BioDynaMo: a general platform for scalable agent-based simulation

Lukas Breitwieser, Ahmad Hesam, Jean de Montigny +10

Motivation: Agent-based modeling is an indispensable tool for studying complex biological systems. However, existing simulators do not always take full advantage of modern hardware…

eess.IV2019★ 7 cited

Tapering Analysis of Airways with Bronchiectasis

Kin Quan, Rebecca J. Shipley, Ryutaro Tanno +6

Bronchiectasis is the permanent dilation of airways. Patients with the disease can suffer recurrent exacerbations, reducing their quality of life. The gold standard to diagnose and…