102 citations · 120 across the 4 of their papers we have counts for
4 papers
A local resampling trick for focused molecular dynamics
Joshua Fass, Forrest York, Matthew Wittmann +2
We describe a method that focuses sampling effort on a user-defined selection of a large system, which can lead to substantial decreases in computational effort by speeding up the…
Bayesian inference-driven model parameterization and model selection for 2CLJQ fluid models
Owen C. Madin, Simon Boothroyd, Richard A. Messerly +3
A high level of physical detail in a molecular model improves its ability to perform high accuracy simulations, but can also significantly affect its complexity and computational c…
End-to-End Differentiable Molecular Mechanics Force Field Construction
Yuanqing Wang, Josh Fass, Benjamin Kaminow +6
Molecular mechanics (MM) potentials have long been a workhorse of computational chemistry. Leveraging accuracy and speed, these functional forms find use in a wide variety of appli…
Graph Nets for Partial Charge Prediction
Yuanqing Wang, Josh Fass, Chaya D. Stern +2
Atomic partial charges are crucial parameters for Molecular Dynamics (MD) simulations, molecular mechanics calculations, and virtual screening, as they determine the electrostatic…