19 citations · 51 across the 8 of their papers we have counts for
13 papers · 1 filter
Correcting Multiple Substitutions in Nanopore-Sequencing Reads
Anisha Banerjee, Yonatan Yehezkeally, Antonia Wachter-Zeh +1
Despite their significant advantages over competing technologies, nanopore sequencers are plagued by high error rates, due to physical characteristics of the nanopore and inherent…
Coding for Strand Breaks in Composite DNA
Frederik Walter, Yonatan Yehezkeally
Due to their sequential nature, traditional DNA synthesis methods are expensive in terms of time and resources. They also fabricate multiple copies of the same strand, introducing…
Correcting a Single Deletion in Reads from a Nanopore Sequencer
Anisha Banerjee, Yonatan Yehezkeally, Antonia Wachter-Zeh +1
Owing to its several merits over other DNA sequencing technologies, nanopore sequencers hold an immense potential to revolutionize the efficiency of DNA storage systems. However, t…
Error-Correcting Codes for Nanopore Sequencing
Anisha Banerjee, Yonatan Yehezkeally, Antonia Wachter-Zeh +1
Nanopore sequencing, superior to other sequencing technologies for DNA storage in multiple aspects, has recently attracted considerable attention. Its high error rates, however, de…
Bounds on Mixed Codes with Finite Alphabets
Yonatan Yehezkeally, Haider Al Kim, Sven Puchinger +1
Mixed codes, which are error-correcting codes in the Cartesian product of different-sized spaces, model degrading storage systems well. While such codes have previously been studie…
Generalized Unique Reconstruction from Substrings
Yonatan Yehezkeally, Daniella Bar-Lev, Sagi Marcovich +1
This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by…