41 citations · 79 across the 6 of their papers we have counts for
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cond-mat.stat-mech2015
Advancements in Milestoning II: Calculating Autocorrelation from Milestoning Data Using Stochastic Path Integrals in Milestone Space
Gianmarc Grazioli, Ioan Andricioaei
The Milestoning method has achieved great success in the calculation of equilibrium kinetic properties such as rate constants from molecular dynamics simulations. The goal of this…
cond-mat.stat-mech2015★ 1 cited
Advancements in Milestoning I: Accelerated Milestoning via "Wind" Assisted Re-weighted Milestoning (WARM)
Gianmarc Grazioli, Ioan Andricioaei
The Milestoning algorithm created by Ron Elber et al. is a method for determining the time scale of processes too complex to be studied using brute force simulation methods. The fu…
physics.bio-ph2015★ 11 cited
Free energy landscape and characteristic forces for the initiation of DNA unzipping
Ahmet Mentes, Ana Maria Florescu, Elizabeth Brunk +3
DNA unzipping, the separation of its double helix into single strands, is crucial in modulating a host of genetic processes. Although the large-scale separation of double-stranded…