activity
20192026
most citedViTally Consistent: Scaling Biological Representation Learning for Cell Microscopy

3 citations · 10 across the 16 of their papers we have counts for

collaborators

16 papers

cs.CL2026

Pretraining with Token-Level Adaptive Latent Chain-of-Thought

Boyi Zeng, Yiqin Hao, He Li +8

Scaling large language models by increasing parameters and training data is increasingly constrained by limited high-quality corpora and rising communication costs. This work explo…

cs.CL2026

ProofVerifier: A Scalable, Diversity-Driven Framework for Natural-Language Proof Verification

Haotong Yang, Zitong Wang, Shijia Kang +7

While large language models (LLMs) have achieved strong performance on mathematical problems with verifiable answers, many advanced problems are proof-based and require evaluating…

cs.AI2025

Lost in Tokenization: Context as the Key to Unlocking Biomolecular Understanding in Scientific LLMs

Kai Zhuang, Jiawei Zhang, Yumou Liu +10

Scientific Large Language Models (Sci-LLMs) have emerged as a promising frontier for accelerating biological discovery. However, these models face a fundamental challenge when proc…

cs.LG2025

DeepForm: Reasoning Large Language Model for Communication System Formulation

Panlong Wu, Ting Wang, Yifei Zhong +3

Communication system formulation is critical for advancing 6G and future wireless technologies, yet it remains a complex, expertise-intensive task. While Large Language Models (LLM…

q-bio.QM2025

Evaluating DNA function understanding in genomic language models using evolutionarily implausible sequences

Shiyu Jiang, Xuyin Liu, Zitong Jerry Wang

Genomic language models (gLMs) hold promise for generating novel, functional DNA sequences for synthetic biology. However, realizing this potential requires models to go beyond evo…

cs.CV2025

DMS-Net:Dual-Modal Multi-Scale Siamese Network for Binocular Fundus Image Classification

Guohao Huo, Zibo Lin, Zitong Wang +2

Ophthalmic diseases pose a significant global health burden. However, traditional diagnostic methods and existing monocular image-based deep learning approaches often overlook the…

cs.LG2024★ 3 cited

ViTally Consistent: Scaling Biological Representation Learning for Cell Microscopy

Kian Kenyon-Dean, Zitong Jerry Wang, John Urbanik +10

Large-scale cell microscopy screens are used in drug discovery and molecular biology research to study the effects of millions of chemical and genetic perturbations on cells. To us…

cs.LG2024★ 1 cited

Imbalanced Graph-Level Anomaly Detection via Counterfactual Augmentation and Feature Learning

Zitong Wang, Xuexiong Luo, Enfeng Song +2

Graph-level anomaly detection (GLAD) has already gained significant importance and has become a popular field of study, attracting considerable attention across numerous downstream…

cs.LG2024

Learning from Sparse Offline Datasets via Conservative Density Estimation

Zhepeng Cen, Zuxin Liu, Zitong Wang +3

Offline reinforcement learning (RL) offers a promising direction for learning policies from pre-collected datasets without requiring further interactions with the environment. Howe…

stat.ML2023

Cheap Bootstrap for Fast Uncertainty Quantification of Stochastic Gradient Descent

Henry Lam, Zitong Wang

Stochastic gradient descent (SGD) or stochastic approximation has been widely used in model training and stochastic optimization. While there is a huge literature on analyzing its…

cs.LG2023

Discriminative Graph-level Anomaly Detection via Dual-students-teacher Model

Fu Lin, Xuexiong Luo, Jia Wu +4

Different from the current node-level anomaly detection task, the goal of graph-level anomaly detection is to find abnormal graphs that significantly differ from others in a graph…

cs.LG2023★ 2 cited

Multi-representations Space Separation based Graph-level Anomaly-aware Detection

Fu Lin, Haonan Gong, Mingkang Li +3

Graph structure patterns are widely used to model different area data recently. How to detect anomalous graph information on these graph data has become a popular research problem.…

q-bio.QM2022

Generating counterfactual explanations of tumor spatial proteomes to discover effective strategies for enhancing immune infiltration

Zitong Jerry Wang, Alexander M. Xu, Aman Bhargava +1

The tumor microenvironment (TME) significantly impacts cancer prognosis due to its immune composition. While therapies for altering the immune composition, including immunotherapie…

q-bio.MN2021★ 2 cited

Inferring gene regulation dynamics from static snapshots of gene expression variability

Euan Joly-Smith, Zitong Jerry Wang, Andreas Hilfinger

Inferring functional relationships within complex networks from static snapshots of a subset of variables is a ubiquitous problem in science. For example, a key challenge of system…

q-bio.CB2021

Signaling receptor localization maximizes cellular information acquisition in spatially-structured, natural environments

Zitong Jerry Wang, Matt Thomson

Cells in natural environments like tissue or soil sense and respond to extracellular ligands with intricately structured and non-monotonic spatial distributions that are sculpted b…

cs.LG2019★ 2 cited

Large-Scale Semi-Supervised Learning via Graph Structure Learning over High-Dense Points

Zitong Wang, Li Wang, Raymond Chan +1

We focus on developing a novel scalable graph-based semi-supervised learning (SSL) method for a small number of labeled data and a large amount of unlabeled data. Due to the lack o…