4 citations · 4 across the 3 of their papers we have counts for
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Testing Binomiality of Chemical Reaction Networks Using Comprehensive Gröbner Systems
Hamid Rahkooy, Thomas Sturm
We consider the problem of binomiality of the steady state ideals of biochemical reaction networks. We are interested in finding polynomial conditions on the parameters such that t…
Parametric Toricity of Steady State Varieties of Reaction Networks
Hamid Rahkooy, Thomas Sturm
We study real steady state varieties of the dynamics of chemical reaction networks. The dynamics are derived using mass action kinetics with parametric reaction rates. The models s…
Analysis of the Conradi-Kahle Algorithm for Detecting Binomiality on Biological Models
Alexandru Iosif, Hamid Rahkooy
We analyze the Conradi-Kahle Algorithm for detecting binomiality. We present experiments using two implementations of the algorithm in Macaulay2 and Maple on biological models and…
Efficiently and Effectively Recognizing Toricity of Steady State Varieties
Dima Grigoriev, Alexandru Iosif, Hamid Rahkooy +2
We consider the problem of testing whether the points in a complex or real variety with non-zero coordinates form a multiplicative group or, more generally, a coset of a multiplica…