16 citations · 20 across the 4 of their papers we have counts for
4 papers
Code Sharing In Prediction Model Research: A Scoping Review
Thomas Sounack, Raffaele Giancotti, Catherine A. Gao +8
Analytical code is essential for reproducing diagnostic and prognostic prediction model research, yet code availability in the published literature remains limited. While the TRIPO…
BioClinical ModernBERT: A State-of-the-Art Long-Context Encoder for Biomedical and Clinical NLP
Thomas Sounack, Joshua Davis, Brigitte Durieux +7
Encoder-based transformer models are central to biomedical and clinical Natural Language Processing (NLP), as their bidirectional self-attention makes them well-suited for efficien…
MedSlice: Fine-Tuned Large Language Models for Secure Clinical Note Sectioning
Joshua Davis, Thomas Sounack, Kate Sciacca +4
Extracting sections from clinical notes is crucial for downstream analysis but is challenging due to variability in formatting and labor-intensive nature of manual sectioning. Whil…
Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation
Kexin Huang, Abhishek Singh, Sitong Chen +4
Clinical notes contain rich data, which is unexploited in predictive modeling compared to structured data. In this work, we developed a new text representation Clinical XLNet for c…