11 citations · 14 across the 4 of their papers we have counts for
4 papers
Theoretical and computational tools to model multistable gene regulatory networks
Federico Bocci, Dongya Jia, Qing Nie +2
The last decade has witnessed a surge of theoretical and computational models to describe the dynamics of complex gene regulatory networks, and how these interactions can give rise…
Noise control and utility: from regulatory network to spatial patterning
Qing Nie, Lingxia Qiao, Yuchi Qiu +2
Stochasticity (or noise) at cellular and molecular levels has been observed extensively as a universal feature for living systems. However, how living systems deal with noise while…
Confederated Modular Differential Equation APIs for Accelerated Algorithm Development and Benchmarking
Christopher Rackauckas, Qing Nie
Performant numerical solving of differential equations is required for large-scale scientific modeling. In this manuscript we focus on two questions: (1) how can researchers empiri…
Stability-Optimized High Order Methods and Stiffness Detection for Pathwise Stiff Stochastic Differential Equations
Christopher Rackauckas, Qing Nie
Stochastic differential equations (SDE) often exhibit large random transitions. This property, which we denote as pathwise stiffness, causes transient bursts of stiffness which lim…