activity
20002012
most citedAdaptively Biased Molecular Dynamics for Free Energy Calculations

196 citations · 246 across the 5 of their papers we have counts for

collaborators

5 papers

physics.chem-ph2012

Toward a universal water model: First principles simulations from the dimer to the liquid phase

Volodymyr Babin, Gregory R. Medders, Francesco Paesani

A full-dimensional molecular model of water, HBB2-pol, derived entirely from first principles, is introduced and employed in computer simulations ranging from the dimer to the liqu…

physics.chem-ph2012

A critical assessment of two-body and three-body interactions in water

Gregory R. Medders, Volodymyr Babin, Francesco Paesani

The microscopic behavior of water under different conditions and in different environments remains the subject of intense debate. A great number of the controversies arise due to t…

physics.chem-ph2009★ 50 cited

Conformational free energies of methyl--L-iduronic and methyl--D-glucuronic acids in water

Volodymyr Babin, Celeste Sagui

We present a simulation protocol that allows for efficient sampling of the degrees of freedom of a solute in explicit solvent. The protocol involves using a non-equilibrium umbrell…

cond-mat.mtrl-sci2007★ 196 cited

Adaptively Biased Molecular Dynamics for Free Energy Calculations

Volodymyr Babin, Christopher Roland, Celeste Sagui

We present an Adaptively Biased Molecular Dynamics (ABMD) method for the computation of the free energy surface of a reaction coordinate using non-equilibrium dynamics. The ABMD me…

cond-mat.soft2000

Effects of confinement on self-assembling systems

A. Ciach, V. Babin, M. Tasinkevych

Systems in which particles can self-assemble into mono- or bilayers can form variety of stable and metastable structures on a nanometer length scale. For this reason confinement ha…