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q-bio.PE2020
Navigation and control of outcomes in a generalized Lotka-Volterra model of the microbiome
Eric W. Jones, Parker Shankin-Clarke, Jean M. Carlson
The generalized Lotka-Volterra (gLV) equations model the microbiome as a collection of interacting ecological species. Here we use a particular experimentally-derived gLV model of…
q-bio.PE2019
Control of ecological outcomes through deliberate parameter changes in a model of the gut microbiome
Zipeng Wang, Eric W. Jones, Joshua M. Mueller +1
The generalized Lotka-Volterra (gLV) equations are a mathematical proxy for ecological dynamics. We focus on a gLV model of the gut microbiome, in which the evolution of the gut mi…
q-bio.PE2018
Steady State Reduction of generalized Lotka-Volterra systems in the microbiome
Eric W. Jones, Jean M. Carlson
The generalized Lotka-Volterra (gLV) equations, a classic model from theoretical ecology, describe the population dynamics of a set of interacting species. As the number of species…