activity
20142025
most citedA novel method for inference of chemical compounds with prescribed topological substructures based on integer programming

7 citations · 17 across the 15 of their papers we have counts for

collaborators

16 papers

math.CO2025

The Minimum Number of Edges in -Saturated Graphs

Xiaoteng Zhou, Kazuya Haraguchi, Hanchun Yuan

Given a family of graphs , a graph is -saturated if it is -free but the addition of any missing edge creates a copy of some $F \in \mathc…

cs.DS2025

Enumeration of Bases in Matroid with Exponentially Large Ground Set

Yuki Nishimura, Kazuya Haraguchi

When we deal with a matroid , we usually assume that it is implicitly given by means of the independence (IND) oracle. Time complexity of many existi…

cs.CE2023

Molecular Design Based on Integer Programming and Splitting Data Sets by Hyperplanes

Jianshen Zhu, Naveed Ahmed Azam, Kazuya Haraguchi +3

A novel framework for designing the molecular structure of chemical compounds with a desired chemical property has recently been proposed. The framework infers a desired chemical g…

cs.DS2023★ 1 cited

A Linear Delay Algorithm for Enumeration of 2-Edge/Vertex-connected Induced Subgraphs

Takumi Tada, Kazuya Haraguchi

For a set system , we call a subset a component. A nonempty subset is a minimal removable set (MRS) of if $C\se…

q-bio.BM2022★ 2 cited

Molecular Design Based on Integer Programming and Quadratic Descriptors in a Two-layered Model

Jianshen Zhu, Naveed Ahmed Azam, Shengjuan Cao +5

A novel framework has recently been proposed for designing the molecular structure of chemical compounds with a desired chemical property, where design of novel drugs is an importa…

cs.LG2021★ 3 cited

A Method for Inferring Polymers Based on Linear Regression and Integer Programming

Ryota Ido, Shengjuan Cao, Jianshen Zhu +5

A novel framework has recently been proposed for designing the molecular structure of chemical compounds with a desired chemical property using both artificial neural networks and…

cs.LG2021

Molecular Design Based on Artificial Neural Networks, Integer Programming and Grid Neighbor Search

Naveed Ahmed Azam, Jianshen Zhu, Kazuya Haraguchi +3

A novel framework has recently been proposed for designing the molecular structure of chemical compounds with a desired chemical property using both artificial neural networks and…

cs.LG2021

An Inverse QSAR Method Based on Linear Regression and Integer Programming

Jianshen Zhu, Naveed Ahmed Azam, Kazuya Haraguchi +3

Recently a novel framework has been proposed for designing the molecular structure of chemical compounds using both artificial neural networks (ANNs) and mixed integer linear progr…

cs.CE2020★ 7 cited

A novel method for inference of chemical compounds with prescribed topological substructures based on integer programming

Tatsuya Akutsu, Hiroshi Nagamochi

Analysis of chemical graphs is becoming a major research topic in computational molecular biology due to its potential applications to drug design. One of the major approaches in s…

cs.DM2020★ 2 cited

Design of Polynomial-delay Enumeration Algorithms in Transitive Systems

Kazuya Haraguchi, Hiroshi Nagamochi

In this paper, as a new notion, we define a transitive system to be a set system on a finite set of elements such that every three sets $X,Y,Z\…

cs.DM2020

Polynomial-delay Enumeration Algorithms in Set Systems

Kazuya Haraguchi, Hiroshi Nagamochi

We consider a set system on a finite set of elements, where we call a set a component. We assume that two oracles $\mathrm{…

cs.DS2019

Maximum Weighted Matching with Few Edge Crossings for 2-Layered Bipartite Graph

Kazuya Haraguchi, Kotaro Torii, Motomu Endo

Let c denote a non-negative constant. Suppose that we are given an edge-weighted bipartite graph G=(V,E) with its 2-layered drawing and a family X of intersecting edge pairs. We co…

cs.DM2019

Recycling Solutions for Vertex Coloring Heuristics

Yasutaka Uchida, Kaito Yajima, Kazuya Haraguchi

The vertex coloring problem is a well-known NP-hard problem and has many applications in operations research and in scheduling. A conventional approach to the problem solves the k-…

cs.DS2018

An Efficient Local Search for the Minimum Independent Dominating Set Problem

Kazuya Haraguchi

In the present paper, we propose an efficient local search for the minimum independent dominating set problem. We consider a local search that uses -swap as the neighborhood ope…

cs.DM2014★ 1 cited

On A Generalization of "Eight Blocks to Madness"

Kazuya Haraguchi

We consider a puzzle such that a set of colored cubes is given as an instance. Each cube has unit length on each edge and its surface is colored so that what we call the Surface Co…

cs.DS2014★ 1 cited

An Efficient Local Search for Partial Latin Square Extension Problem

Kazuya Haraguchi

A partial Latin square (PLS) is a partial assignment of n symbols to an nxn grid such that, in each row and in each column, each symbol appears at most once. The partial Latin squa…