activity
20202026
most citedExploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing

173 citations · 300 across the 13 of their papers we have counts for

collaborators

13 papers

cs.CV2026

Paired Uterine Whole-Slide Images and Pathology Reports for Multimodal Computational Pathology

Han Li, Jingsong Liu, Ayako Ura +14

Uterine diseases represent an important category of gynecologic pathology and require accurate histopathological assessment for diagnosis and treatment planning. Whole-slide images…

cs.LG2026

The Mean is the Mirage: Entropy-Adaptive Model Merging under Heterogeneous Domain Shifts in Medical Imaging

Sameer Ambekar, Reza Nasirigerdeh, Peter J. Schuffler +3

Model merging under unseen test-time distribution shifts often renders naive strategies, such as mean averaging unreliable. This challenge is especially acute in medical imaging, w…

cs.LG2024

Improved Localized Machine Unlearning Through the Lens of Memorization

Reihaneh Torkzadehmahani, Reza Nasirigerdeh, Georgios Kaissis +3

Machine unlearning refers to removing the influence of a specified subset of training data from a machine learning model, efficiently, after it has already been trained. This is im…

cs.LG2024★ 1 cited

Machine Unlearning for Medical Imaging

Reza Nasirigerdeh, Nader Razmi, Julia A. Schnabel +2

Machine unlearning is the process of removing the impact of a particular set of training samples from a pretrained model. It aims to fulfill the "right to be forgotten", which gran…

cs.LG2022★ 1 cited

Kernel Normalized Convolutional Networks for Privacy-Preserving Machine Learning

Reza Nasirigerdeh, Javad Torkzadehmahani, Daniel Rueckert +1

Normalization is an important but understudied challenge in privacy-related application domains such as federated learning (FL), differential privacy (DP), and differentially priva…

cs.LG2022

Label Noise-Robust Learning using a Confidence-Based Sieving Strategy

Reihaneh Torkzadehmahani, Reza Nasirigerdeh, Daniel Rueckert +1

In learning tasks with label noise, improving model robustness against overfitting is a pivotal challenge because the model eventually memorizes labels, including the noisy ones. I…

cs.LG2022★ 1 cited

Kernel Normalized Convolutional Networks

Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Daniel Rueckert +1

Existing convolutional neural network architectures frequently rely upon batch normalization (BatchNorm) to effectively train the model. BatchNorm, however, performs poorly with sm…

cs.LG2021★ 1 cited

The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond

Julian Matschinske, Julian Späth, Reza Nasirigerdeh +29

Machine Learning (ML) and Artificial Intelligence (AI) have shown promising results in many areas and are driven by the increasing amount of available data. However, this data is o…

cs.LG2021★ 3 cited

HyFed: A Hybrid Federated Framework for Privacy-preserving Machine Learning

Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Julian Matschinske +3

Federated learning (FL) enables multiple clients to jointly train a global model under the coordination of a central server. Although FL is a privacy-aware paradigm, where raw data…

q-bio.QM2020★ 2 cited

Flimma: a federated and privacy-preserving tool for differential gene expression analysis

Olga Zolotareva, Reza Nasirigerdeh, Julian Matschinske +9

Aggregating transcriptomics data across hospitals can increase sensitivity and robustness of differential expression analyses, yielding deeper clinical insights. As data exchange i…

cs.LG2020★ 8 cited

Federated Multi-Mini-Batch: An Efficient Training Approach to Federated Learning in Non-IID Environments

Reza Nasirigerdeh, Mohammad Bakhtiari, Reihaneh Torkzadehmahani +4

Federated learning has faced performance and network communication challenges, especially in the environments where the data is not independent and identically distributed (IID) ac…

cs.CR2020★ 110 cited

Privacy-preserving Artificial Intelligence Techniques in Biomedicine

Reihaneh Torkzadehmahani, Reza Nasirigerdeh, David B. Blumenthal +22

Artificial intelligence (AI) has been successfully applied in numerous scientific domains. In biomedicine, AI has already shown tremendous potential, e.g. in the interpretation of…

q-bio.MN2020★ 173 cited

Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing

Sepideh Sadegh, Julian Matschinske, David B. Blumenthal +14

Coronavirus Disease-2019 (COVID-19) is an infectious disease caused by the SARS-CoV-2 virus. It was first identified in Wuhan, China, and has since spread causing a global pandemic…