173 citations · 296 across the 7 of their papers we have counts for
7 papers
Privacy-Preserving Multi-Center Differential Protein Abundance Analysis with FedProt
Yuliya Burankova, Miriam Abele, Mohammad Bakhtiari +28
Quantitative mass spectrometry has revolutionized proteomics by enabling simultaneous quantification of thousands of proteins. Pooling patient-derived data from multiple institutio…
Drugst.One -- A plug-and-play solution for online systems medicine and network-based drug repurposing
Andreas Maier, Michael Hartung, Mark Abovsky +36
In recent decades, the development of new drugs has become increasingly expensive and inefficient, and the molecular mechanisms of most pharmaceuticals remain poorly understood. In…
The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond
Julian Matschinske, Julian Späth, Reza Nasirigerdeh +29
Machine Learning (ML) and Artificial Intelligence (AI) have shown promising results in many areas and are driven by the increasing amount of available data. However, this data is o…
HyFed: A Hybrid Federated Framework for Privacy-preserving Machine Learning
Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Julian Matschinske +3
Federated learning (FL) enables multiple clients to jointly train a global model under the coordination of a central server. Although FL is a privacy-aware paradigm, where raw data…
Flimma: a federated and privacy-preserving tool for differential gene expression analysis
Olga Zolotareva, Reza Nasirigerdeh, Julian Matschinske +9
Aggregating transcriptomics data across hospitals can increase sensitivity and robustness of differential expression analyses, yielding deeper clinical insights. As data exchange i…
Privacy-preserving Artificial Intelligence Techniques in Biomedicine
Reihaneh Torkzadehmahani, Reza Nasirigerdeh, David B. Blumenthal +22
Artificial intelligence (AI) has been successfully applied in numerous scientific domains. In biomedicine, AI has already shown tremendous potential, e.g. in the interpretation of…
Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing
Sepideh Sadegh, Julian Matschinske, David B. Blumenthal +14
Coronavirus Disease-2019 (COVID-19) is an infectious disease caused by the SARS-CoV-2 virus. It was first identified in Wuhan, China, and has since spread causing a global pandemic…