activity
20182023
most citedMapping the Human Body at Cellular Resolution -- The NIH Common Fund Human BioMolecular Atlas Program

690 citations · 909 across the 7 of their papers we have counts for

collaborators

8 papers

cs.HC2023★ 5 cited

Beyond Generating Code: Evaluating GPT on a Data Visualization Course

Chen Zhu-Tian, Chenyang Zhang, Qianwen Wang +5

This paper presents an empirical evaluation of the performance of the Generative Pre-trained Transformer (GPT) model in Harvard's CS171 data visualization course. While previous st…

q-bio.OT2021

MITI Minimum Information guidelines for highly multiplexed tissue images

Denis Schapiro, Clarence Yapp, Artem Sokolov +36

The imminent release of tissue atlases combining multi-channel microscopy with single cell sequencing and other omics data from normal and diseased specimens creates an urgent need…

cs.HC2020

A Generic Framework and Library for Exploration of Small Multiples through Interactive Piling

Fritz Lekschas, Xinyi Zhou, Wei Chen +3

Small multiples are miniature representations of visual information used generically across many domains. Handling large numbers of small multiples imposes challenges on many analy…

q-bio.GN2019★ 54 cited

Guidelines for reporting single-cell RNA-Seq experiments

Anja Füllgrabe, Nancy George, Matthew Green +16

Single-cell RNA-Sequencing (scRNA-Seq) has undergone major technological advances in recent years, enabling the conception of various organism-level cell atlassing projects. With i…

cs.HC2019★ 15 cited

Periphery Plots for Contextualizing Heterogeneous Time-Based Charts

Bryce Morrow, Trevor Manz, Arlene E. Chung +2

Patterns in temporal data can often be found across different scales, such as days, weeks, and months, making effective visualization of time-based data challenging. Here we propos…

q-bio.GN2019★ 145 cited

Tasks, Techniques, and Tools for Genomic Data Visualization

Sabrina Nusrat, Theresa Harbig, Nils Gehlenborg

Genomic data visualization is essential for interpretation and hypothesis generation as well as a valuable aid in communicating discoveries. Visual tools bridge the gap between alg…

q-bio.OT2019★ 690 cited

Mapping the Human Body at Cellular Resolution -- The NIH Common Fund Human BioMolecular Atlas Program

Michael P Snyder, Shin Lin, Amanda Posgai +22

Transformative technologies are enabling the construction of three dimensional (3D) maps of tissues with unprecedented spatial and molecular resolution. Over the next seven years,…

cs.IR2018

Visual Pattern-Driven Exploration of Big Data

Michael Behrisch, Robert Krueger, Fritz Lekschas +3

Pattern extraction algorithms are enabling insights into the ever-growing amount of today's datasets by translating reoccurring data properties into compact representations. Yet, a…