161 citations · 190 across the 7 of their papers we have counts for
8 papers
Toward Enabling Reproducibility for Data-Intensive Research using the Whole Tale Platform
Kyle Chard, Niall Gaffney, Mihael Hategan +9
Whole Tale http://wholetale.org is a web-based, open-source platform for reproducible research supporting the creation, sharing, execution, and verification of "Tales" for the scie…
A data-driven method for quantifying the impact of a genetic circuit on its host
Aqib Hasnain, Subhrajit Sinha, Yuval Dorfan +12
Genetic circuits are designed to implement certain logic in living cells, keeping burden on the host cell minimal. However, manipulating the genome often will have a significant im…
The demise of the filesystem and multi level service architecture
William O'Mullane, Niall Gaffney, Frossie Economou +3
Many astronomy data centres still work on filesystems. Industry has moved on; current practice in computing infrastructure is to achieve Big Data scalability using object stores ra…
Petabytes to Science
Amanda E. Bauer, Eric C. Bellm, Adam S. Bolton +24
A Kavli foundation sponsored workshop on the theme \emph{Petabytes to Science} was held 12 to 14 of February 2019 in Las Vegas. The aim of the this workshop was to di…
FanStore: Enabling Efficient and Scalable I/O for Distributed Deep Learning
Zhao Zhang, Lei Huang, Uri Manor +5
Emerging Deep Learning (DL) applications introduce heavy I/O workloads on computer clusters. The inherent long lasting, repeated, and random file access pattern can easily saturate…
Computing Environments for Reproducibility: Capturing the "Whole Tale"
Adam Brinckman, Kyle Chard, Niall Gaffney +11
The act of sharing scientific knowledge is rapidly evolving away from traditional articles and presentations to the delivery of executable objects that integrate the data and compu…
Capturing the "Whole Tale" of Computational Research: Reproducibility in Computing Environments
Bertram Ludaescher, Kyle Chard, Niall Gaffney +4
We present an overview of the recently funded "Merging Science and Cyberinfrastructure Pathways: The Whole Tale" project (NSF award #1541450). Our approach has two nested goals: 1)…
Ten Year Review of Queue Scheduling of the Hobby-Eberly Telescope
Matthew Shetrone, Mark E. Cornell, James R. Fowler +10
This paper presents a summary of the first 10 years of operating the Hobby-Eberly Telescope (HET) in queue mode. The scheduling can be quite complex but has worked effectively for…