390 citations · 541 across the 25 of their papers we have counts for
9 papers · 1 filter
SI-MIL: Taming Deep MIL for Self-Interpretability in Gigapixel Histopathology
Saarthak Kapse, Pushpak Pati, Srijan Das +7
Introducing interpretability and reasoning into Multiple Instance Learning (MIL) methods for Whole Slide Image (WSI) analysis is challenging, given the complexity of gigapixel slid…
Learned representation-guided diffusion models for large-image generation
Alexandros Graikos, Srikar Yellapragada, Minh-Quan Le +4
To synthesize high-fidelity samples, diffusion models typically require auxiliary data to guide the generation process. However, it is impractical to procure the painstaking patch-…
Attention De-sparsification Matters: Inducing Diversity in Digital Pathology Representation Learning
Saarthak Kapse, Srijan Das, Jingwei Zhang +4
We propose DiRL, a Diversity-inducing Representation Learning technique for histopathology imaging. Self-supervised learning techniques, such as contrastive and non-contrastive app…
Open and reusable deep learning for pathology with WSInfer and QuPath
Jakub R. Kaczmarzyk, Alan O'Callaghan, Fiona Inglis +5
The field of digital pathology has seen a proliferation of deep learning models in recent years. Despite substantial progress, it remains rare for other researchers and pathologist…
PathLDM: Text conditioned Latent Diffusion Model for Histopathology
Srikar Yellapragada, Alexandros Graikos, Prateek Prasanna +3
To achieve high-quality results, diffusion models must be trained on large datasets. This can be notably prohibitive for models in specialized domains, such as computational pathol…
SAM-Path: A Segment Anything Model for Semantic Segmentation in Digital Pathology
Jingwei Zhang, Ke Ma, Saarthak Kapse +4
Semantic segmentations of pathological entities have crucial clinical value in computational pathology workflows. Foundation models, such as the Segment Anything Model (SAM), have…
Halcyon -- A Pathology Imaging and Feature analysis and Management System
Erich Bremer, Tammy DiPrima, Joseph Balsamo +3
Halcyon is a new pathology imaging analysis and feature management system based on W3C linked-data open standards and is designed to scale to support the needs for the voluminous p…
Topology-Guided Multi-Class Cell Context Generation for Digital Pathology
Shahira Abousamra, Rajarsi Gupta, Tahsin Kurc +3
In digital pathology, the spatial context of cells is important for cell classification, cancer diagnosis and prognosis. To model such complex cell context, however, is challenging…
Prompt-MIL: Boosting Multi-Instance Learning Schemes via Task-specific Prompt Tuning
Jingwei Zhang, Saarthak Kapse, Ke Ma +4
Whole slide image (WSI) classification is a critical task in computational pathology, requiring the processing of gigapixel-sized images, which is challenging for current deep-lear…