activity
20142020
most citedIn Silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem Cell Transplant Donors and Recipients: Understanding the Quantitative Immuno-biology of Allogeneic Transplantation

30 citations · 79 across the 7 of their papers we have counts for

collaborators

7 papers

q-bio.CB2020★ 4 cited

Immunological determinants of clinical outcomes in COVID-19: A quantitative perspective

Elizabeth Krieger, Nicole Vissichelli, Stefan Leichtle +13

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has a variable clinical presentation that ranges from asymptomatic, to severe disease with cytokine storm. The mortalit…

q-bio.QM2016★ 25 cited

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides: Understanding Randomness in Clinical Outcomes Following Stem Cell Transplantation

V Koparde, B Abdul Razzaq, T Suntum +12

Alloreactivity following stem cell transplantation (SCT) is difficult to predict in patients undergoing transplantation from HLA matched donors. In this study we performed whole ex…

q-bio.GN2016

Cytomegalovirus Antigenic Mimicry of Human Alloreactive Peptides: A Potential Trigger for Graft versus Host Disease

Charles Hall, Vishal Koparde, Max Jameson-Lee +9

The association between human cytomegalovirus (hCMV) reactivation and the development of graft-versus-host-disease (GVHD) has been observed in stem cell transplantation (SCT). Seve…

q-bio.CB2015

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides Demonstrates Different Alloreactivity Potential In HLA-Matched and Mismatched Donor-Recipient Pairs

B. Abdul Razzaq, A. Scalora, V. Koparde +14

Stem cell transplants may be considered as dynamical systems to allow sequence differences across the exomes of the transplant donors and recipients to be used to simulate an allor…

q-bio.QM2014★ 30 cited

In Silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem Cell Transplant Donors and Recipients: Understanding the Quantitative Immuno-biology of Allogeneic Transplantation

Max Jameson-Lee, Vishal Koparde, Phil Griffith +12

Donor T cell mediated graft vs. host effects may result from the aggregate alloreactivity to minor histocompatibility antigens (mHA) presented by the HLA in each donor-recipient pa…

q-bio.OT2014★ 20 cited

Stem Cell Transplantation As A Dynamical System: Are Clinical Outcomes Deterministic?

Amir A Toor, Jared D Kobulnicky, Salman Salman +14

Outcomes in stem cell transplantation (SCT) are modeled using probability theory. However the clinical course following SCT appears to demonstrate many characteristics of dynamical…