activity
20202025
most citedAgent Laboratory: Using LLM Agents as Research Assistants

29 citations · 104 across the 23 of their papers we have counts for

collaborators

24 papers

q-bio.OT2025★ 1 cited

Current validation practice undermines surgical AI development

Annika Reinke, Ziying O. Li, Minu D. Tizabi +98

Surgical data science (SDS) is rapidly advancing, yet clinical adoption of artificial intelligence (AI) in surgery remains limited, with inadequate validation as an important contr…

cs.CL2025

MedBrowseComp: Benchmarking Medical Deep Research and Computer Use

Shan Chen, Pedro Moreira, Yuxin Xiao +6

Large language models (LLMs) are increasingly envisioned as decision-support tools in clinical practice, yet safe clinical reasoning demands integrating heterogeneous knowledge bas…

cs.RO2025★ 1 cited

SRT-H: A Hierarchical Framework for Autonomous Surgery via Language Conditioned Imitation Learning

Ji Woong Kim, Juo-Tung Chen, Pascal Hansen +11

Research on autonomous surgery has largely focused on simple task automation in controlled environments. However, real-world surgical applications demand dexterous manipulation ove…

cs.AI2025★ 4 cited

TxGemma: Efficient and Agentic LLMs for Therapeutics

Eric Wang, Samuel Schmidgall, Paul F. Jaeger +6

Therapeutic development is a costly and high-risk endeavor that is often plagued by high failure rates. To address this, we introduce TxGemma, a suite of efficient, generalist larg…

cs.CV2025

Surgical Gaussian Surfels: Highly Accurate Real-time Surgical Scene Rendering using Gaussian Surfels

Idris O. Sunmola, Zhenjun Zhao, Samuel Schmidgall +4

Accurate geometric reconstruction of deformable tissues in monocular endoscopic video remains a fundamental challenge in robot-assisted minimally invasive surgery. Although recent…

cs.HC2025★ 29 cited

Agent Laboratory: Using LLM Agents as Research Assistants

Samuel Schmidgall, Yusheng Su, Ze Wang +7

Historically, scientific discovery has been a lengthy and costly process, demanding substantial time and resources from initial conception to final results. To accelerate scientifi…

cs.RO2024

Tracking Tumors under Deformation from Partial Point Clouds using Occupancy Networks

Pit Henrich, Jiawei Liu, Jiawei Ge +5

To track tumors during surgery, information from preoperative CT scans is used to determine their position. However, as the surgeon operates, the tumor may be deformed which presen…

cs.RO2024★ 8 cited

Surgical Robot Transformer (SRT): Imitation Learning for Surgical Tasks

Ji Woong Kim, Tony Z. Zhao, Samuel Schmidgall +4

We explore whether surgical manipulation tasks can be learned on the da Vinci robot via imitation learning. However, the da Vinci system presents unique challenges which hinder str…

cs.HC2024★ 22 cited

AgentClinic: a multimodal agent benchmark to evaluate AI in simulated clinical environments

Samuel Schmidgall, Rojin Ziaei, Carl Harris +3

Evaluating large language models (LLM) in clinical scenarios is crucial to assessing their potential clinical utility. Existing benchmarks rely heavily on static question-answering…

cs.CV2024★ 2 cited

General surgery vision transformer: A video pre-trained foundation model for general surgery

Samuel Schmidgall, Ji Woong Kim, Jeffrey Jopling +1

The absence of openly accessible data and specialized foundation models is a major barrier for computational research in surgery. Toward this, (i) we open-source the largest datase…

cs.CL2024★ 10 cited

Addressing cognitive bias in medical language models

Samuel Schmidgall, Carl Harris, Ime Essien +7

There is increasing interest in the application large language models (LLMs) to the medical field, in part because of their impressive performance on medical exam questions. While…

cs.RO2024

General-purpose foundation models for increased autonomy in robot-assisted surgery

Samuel Schmidgall, Ji Woong Kim, Alan Kuntz +2

The dominant paradigm for end-to-end robot learning focuses on optimizing task-specific objectives that solve a single robotic problem such as picking up an object or reaching a ta…

cs.CL2023★ 2 cited

Language models are susceptible to incorrect patient self-diagnosis in medical applications

Rojin Ziaei, Samuel Schmidgall

Large language models (LLMs) are becoming increasingly relevant as a potential tool for healthcare, aiding communication between clinicians, researchers, and patients. However, tra…

cs.RO2023★ 1 cited

Synaptic motor adaptation: A three-factor learning rule for adaptive robotic control in spiking neural networks

Samuel Schmidgall, Joe Hays

Legged robots operating in real-world environments must possess the ability to rapidly adapt to unexpected conditions, such as changing terrains and varying payloads. This paper in…

cs.NE2023★ 5 cited

Brain-inspired learning in artificial neural networks: a review

Samuel Schmidgall, Jascha Achterberg, Thomas Miconi +4

Artificial neural networks (ANNs) have emerged as an essential tool in machine learning, achieving remarkable success across diverse domains, including image and speech generation,…

cs.NE2022

Biological connectomes as a representation for the architecture of artificial neural networks

Samuel Schmidgall, Catherine Schuman, Maryam Parsa

Grand efforts in neuroscience are working toward mapping the connectomes of many new species, including the near completion of the Drosophila melanogaster. It is important to ask w…

cs.NE2022

Learning to learn online with neuromodulated synaptic plasticity in spiking neural networks

Samuel Schmidgall, Joe Hays

We propose that in order to harness our understanding of neuroscience toward machine learning, we must first have powerful tools for training brain-like models of learning. Althoug…

cs.NE2021

Stable Lifelong Learning: Spiking neurons as a solution to instability in plastic neural networks

Samuel Schmidgall, Joe Hays

Synaptic plasticity poses itself as a powerful method of self-regulated unsupervised learning in neural networks. A recent resurgence of interest has developed in utilizing Artific…

cs.NE2021

Self-Replicating Neural Programs

Samuel Schmidgall

In this work, a neural network is trained to replicate the code that trains it using only its own output as input. A paradigm for evolutionary self-replication in neural programs i…

cs.NE2021★ 1 cited

Evolutionary Self-Replication as a Mechanism for Producing Artificial Intelligence

Samuel Schmidgall, Joseph Hays

Can reproduction alone in the context of survival produce intelligence in our machines? In this work, self-replication is explored as a mechanism for the emergence of intelligent b…

cs.NE2021★ 11 cited

SpikePropamine: Differentiable Plasticity in Spiking Neural Networks

Samuel Schmidgall, Julia Ashkanazy, Wallace Lawson +1

The adaptive changes in synaptic efficacy that occur between spiking neurons have been demonstrated to play a critical role in learning for biological neural networks. Despite this…

cs.NE2021

Self-Constructing Neural Networks Through Random Mutation

Samuel Schmidgall

The search for neural architecture is producing many of the most exciting results in artificial intelligence. It has increasingly become apparent that task-specific neural architec…

math.DS2020

Locked fronts in a discrete time discrete space population model

Matt Holzer, Zachary Richey, Wyatt Rush +1

A model of population growth and dispersal is considered where the spatial habitat is a lattice and reproduction occurs generationally. The resulting discrete dynamical systems exh…

cs.NE2020★ 7 cited

Adaptive Reinforcement Learning through Evolving Self-Modifying Neural Networks

Samuel Schmidgall

The adaptive learning capabilities seen in biological neural networks are largely a product of the self-modifying behavior emerging from online plastic changes in synaptic connecti…