activity
20182021
most citedParameterized algorithms for identifying gene co-expression modules via weighted clique decomposition

3 citations · 3 across the 1 of their papers we have counts for

collaborators

6 papers

math.CO2021

Connected -partition of -connected graphs and -claw-free graphs

Ralf Borndörfer, Katrin Casel, Davis Issac +3

A connected partition is a partition of the vertices of a graph into sets that induce connected subgraphs. Such partitions naturally occur in many application areas such as road ne…

cs.DS20213 cited

Parameterized algorithms for identifying gene co-expression modules via weighted clique decomposition

Madison Cooley, Casey S. Greene, Davis Issac +2

We present a new combinatorial model for identifying regulatory modules in gene co-expression data using a decomposition into weighted cliques. To capture complex interaction effec…

cs.DS2020

Balanced Crown Decomposition for Connectivity Constraints

Katrin Casel, Tobias Friedrich, Davis Issac +2

We introduce the balanced crown decomposition that captures the structure imposed on graphs by their connected induced subgraphs of a given size. Such subgraphs are a popular model…

math.CO2020

Upper Bounding Rainbow Connection Number by Forest Number

L. Sunil Chandran, Davis Issac, Juho Lauri +1

A path in an edge-colored graph is rainbow if no two edges of it are colored the same, and the graph is rainbow-connected if there is a rainbow path between each pair of its vertic…

cs.DS2020

Fixed-Parameter Tractability of the Weighted Edge Clique Partition Problem

Andreas Emil Feldmann, Davis Issac, Ashutosh Rai

We develop an FPT algorithm and a bi-kernel for the Weighted Edge Clique Partition (WECP) problem, where a graph with vertices and integer edge weights is given together with a…

cs.DS2018

Spanning Tree Congestion and Computation of Generalized Győri-Lovász Partition

L. Sunil Chandran, Yun Kuen Cheung, Davis Issac

We study a natural problem in graph sparsification, the Spanning Tree Congestion (\STC) problem. Informally, the \STC problem seeks a spanning tree with no tree-edge \emph{routing}…