1 citations · 1 across the 1 of their papers we have counts for
3 papers
physics.comp-ph2020★ 1 cited
Iterative trajectory reweighting for estimation of equilibrium and non-equilibrium observables
John D. Russo, Jeremy Copperman, Daniel M. Zuckerman
We present two algorithms by which a set of short, unbiased trajectories can be iteratively reweighted to obtain various observables. The first algorithm estimates the stationary (…
cond-mat.stat-mech2019
Accelerated estimation of long-timescale kinetics by combining weighted ensemble simulation with Markov model "microstates" using non-Markovian theory
Jeremy Copperman, Daniel Zuckerman
The weighted ensemble (WE) simulation strategy provides unbiased sampling of non-equilibrium processes, such as molecular folding or binding, but the extraction of rate constants r…
cond-mat.stat-mech2018
Transient probability currents provide upper and lower bounds on non-equilibrium steady-state currents in the Smoluchowski picture
Jeremy Copperman, David Aristoff, Dmitrii E. Makarov +2
Probability currents are fundamental in characterizing the kinetics of non-equilibrium processes. Notably, the steady-state current for a source-sink system can provide th…