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LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset
Yiping Jiao, Jeroen van der Laak, Shadi Albarqouni +18
We introduce LYSTO, the Lymphocyte Assessment Hackathon, which was held in conjunction with the MICCAI 2019 Conference in Shenzen (China). The competition required participants to…
Mitosis domain generalization in histopathology images -- The MIDOG challenge
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram +32
The density of mitotic figures within tumor tissue is known to be highly correlated with tumor proliferation and thus is an important marker in tumor grading. Recognition of mitoti…
Automated Scoring of Nuclear Pleomorphism Spectrum with Pathologist-level Performance in Breast Cancer
Caner Mercan, Maschenka Balkenhol, Roberto Salgado +13
Nuclear pleomorphism, defined herein as the extent of abnormalities in the overall appearance of tumor nuclei, is one of the components of the three-tiered breast cancer grading. G…
HookNet: multi-resolution convolutional neural networks for semantic segmentation in histopathology whole-slide images
Mart van Rijthoven, Maschenka Balkenhol, Karina Siliņa +2
We propose HookNet, a semantic segmentation model for histopathology whole-slide images, which combines context and details via multiple branches of encoder-decoder convolutional n…
Extending Unsupervised Neural Image Compression With Supervised Multitask Learning
David Tellez, Diederik Hoppener, Cornelis Verhoef +5
We focus on the problem of training convolutional neural networks on gigapixel histopathology images to predict image-level targets. For this purpose, we extend Neural Image Compre…
Virtual staining for mitosis detection in Breast Histopathology
Caner Mercan, Germonda Reijnen-Mooij, David Tellez Martin +4
We propose a virtual staining methodology based on Generative Adversarial Networks to map histopathology images of breast cancer tissue from H&E stain to PHH3 and vice versa. We us…