259 citations · 413 across the 24 of their papers we have counts for
10 papers · 1 filter
Globally Optimal Pose from Orthographic Silhouettes
Agniva Sengupta, Dilara Kuş, Jianning Li +1
We solve the problem of determining the pose of known shapes in from their unoccluded silhouettes. The pose is determined up to global optimality using a simple yet…
Deep Medial Voxels: Learned Medial Axis Approximations for Anatomical Shape Modeling
Antonio Pepe, Richard Schussnig, Jianning Li +3
Shape reconstruction from imaging volumes is a recurring need in medical image analysis. Common workflows start with a segmentation step, followed by careful post-processing and,fi…
Cyto R-CNN and CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images
Johannes Raufeisen, Kunpeng Xie, Fabian Hörst +9
Background: Cell segmentation in bright-field histological slides is a crucial topic in medical image analysis. Having access to accurate segmentation allows researchers to examine…
MedShapeNet -- A Large-Scale Dataset of 3D Medical Shapes for Computer Vision
Jianning Li, Zongwei Zhou, Jiancheng Yang +154
Prior to the deep learning era, shape was commonly used to describe the objects. Nowadays, state-of-the-art (SOTA) algorithms in medical imaging are predominantly diverging from co…
Why is the winner the best?
Matthias Eisenmann, Annika Reinke, Vivienn Weru +122
International benchmarking competitions have become fundamental for the comparative performance assessment of image analysis methods. However, little attention has been given to in…
Biomedical image analysis competitions: The state of current participation practice
Matthias Eisenmann, Annika Reinke, Vivienn Weru +352
The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known abou…
Training β-VAE by Aggregating a Learned Gaussian Posterior with a Decoupled Decoder
Jianning Li, Jana Fragemann, Seyed-Ahmad Ahmadi +2
The reconstruction loss and the Kullback-Leibler divergence (KLD) loss in a variational autoencoder (VAE) often play antagonistic roles, and tuning the weight of the KLD loss in $β…
FakeNews: GAN-based generation of realistic 3D volumetric data -- A systematic review and taxonomy
André Ferreira, Jianning Li, Kelsey L. Pomykala +3
With the massive proliferation of data-driven algorithms, such as deep learning-based approaches, the availability of high-quality data is of great interest. Volumetric data is ver…
Back to the Roots: Reconstructing Large and Complex Cranial Defects using an Image-based Statistical Shape Model
Jianning Li, David G. Ellis, Antonio Pepe +4
Designing implants for large and complex cranial defects is a challenging task, even for professional designers. Current efforts on automating the design process focused mainly on…
A Baseline Approach for AutoImplant: the MICCAI 2020 Cranial Implant Design Challenge
Jianning Li, Antonio Pepe, Christina Gsaxner +2
In this study, we present a baseline approach for AutoImplant (https://autoimplant.grand-challenge.org/) - the cranial implant design challenge, which, as suggested by the organize…