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q-bio.GN2019
Fast Processing and Querying of 170TB of Genomics Data via a Repeated And Merged BloOm Filter (RAMBO)
Gaurav Gupta, Minghao Yan, Benjamin Coleman +5
DNA sequencing, especially of microbial genomes and metagenomes, has been at the core of recent research advances in large-scale comparative genomics. The data deluge has resulted…
cs.DS2019
RAMBO: Repeated And Merged BloOm Filter for Ultra-fast Multiple Set Membership Testing (MSMT) on Large-Scale Data
Gaurav Gupta, Minghao Yan, Benjamin Coleman +4
Multiple Set Membership Testing (MSMT) is a well-known problem in a variety of search and query applications. Given a dataset of K different sets and a query q, it aims to find all…