activity
20202024
most citedTorchIO: A Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning

622 citations · 708 across the 9 of their papers we have counts for

collaborators

9 papers

cs.CV2024★ 11 cited

SAR-RARP50: Segmentation of surgical instrumentation and Action Recognition on Robot-Assisted Radical Prostatectomy Challenge

Dimitrios Psychogyios, Emanuele Colleoni, Beatrice Van Amsterdam +47

Surgical tool segmentation and action recognition are fundamental building blocks in many computer-assisted intervention applications, ranging from surgical skills assessment to de…

eess.IV2023★ 1 cited

ARHNet: Adaptive Region Harmonization for Lesion-aware Augmentation to Improve Segmentation Performance

Jiayu Huo, Yang Liu, Xi Ouyang +3

Accurately segmenting brain lesions in MRI scans is critical for providing patients with prognoses and neurological monitoring. However, the performance of CNN-based segmentation m…

eess.IV2022★ 4 cited

MAPPING: Model Average with Post-processing for Stroke Lesion Segmentation

Jiayu Huo, Liyun Chen, Yang Liu +4

Accurate stroke lesion segmentation plays a pivotal role in stroke rehabilitation research, to provide lesion shape and size information which can be used for quantification of the…

cs.CV2022

Brain Lesion Synthesis via Progressive Adversarial Variational Auto-Encoder

Jiayu Huo, Vejay Vakharia, Chengyuan Wu +4

Laser interstitial thermal therapy (LITT) is a novel minimally invasive treatment that is used to ablate intracranial structures to treat mesial temporal lobe epilepsy (MTLE). Regi…

cs.CV2021★ 21 cited

Transfer Learning of Deep Spatiotemporal Networks to Model Arbitrarily Long Videos of Seizures

Fernando Pérez-García, Catherine Scott, Rachel Sparks +2

Detailed analysis of seizure semiology, the symptoms and signs which occur during a seizure, is critical for management of epilepsy patients. Inter-rater reliability using qualitat…

eess.IV2021★ 32 cited

A self-supervised learning strategy for postoperative brain cavity segmentation simulating resections

Fernando Pérez-García, Reuben Dorent, Michele Rizzi +9

Accurate segmentation of brain resection cavities (RCs) aids in postoperative analysis and determining follow-up treatment. Convolutional neural networks (CNNs) are the state-of-th…

eess.IV2020

Enhancing Fiber Orientation Distributions using convolutional Neural Networks

Oeslle Lucena, Sjoerd B. Vos, Vejay Vakharia +4

Accurate local fiber orientation distribution (FOD) modeling based on diffusion magnetic resonance imaging (dMRI) capable of resolving complex fiber configurations benefits from sp…

eess.IV2020★ 17 cited

Simulation of Brain Resection for Cavity Segmentation Using Self-Supervised and Semi-Supervised Learning

Fernando Pérez-García, Roman Rodionov, Ali Alim-Marvasti +3

Resective surgery may be curative for drug-resistant focal epilepsy, but only 40% to 70% of patients achieve seizure freedom after surgery. Retrospective quantitative analysis coul…

eess.IV2020★ 622 cited

TorchIO: A Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning

Fernando Pérez-García, Rachel Sparks, Sébastien Ourselin

Processing of medical images such as MRI or CT presents unique challenges compared to RGB images typically used in computer vision. These include a lack of labels for large dataset…