189 citations · 213 across the 14 of their papers we have counts for
5 papers · 1 filter
ASIST: Annotation-free synthetic instance segmentation and tracking for microscope video analysis
Quan Liu, Isabella M. Gaeta, Mengyang Zhao +6
Instance object segmentation and tracking provide comprehensive quantification of objects across microscope videos. The recent single-stage pixel-embedding based deep learning appr…
CaCL: Class-aware Codebook Learning for Weakly Supervised Segmentation on Diffuse Image Patterns
Ruining Deng, Quan Liu, Shunxing Bao +5
Weakly supervised learning has been rapidly advanced in biomedical image analysis to achieve pixel-wise labels (segmentation) from image-wise annotations (classification), as biome…
Instance Segmentation for Whole Slide Imaging: End-to-End or Detect-Then-Segment
Aadarsh Jha, Haichun Yang, Ruining Deng +3
Automatic instance segmentation of glomeruli within kidney Whole Slide Imaging (WSI) is essential for clinical research in renal pathology. In computer vision, the end-to-end insta…
Faster Mean-shift: GPU-accelerated clustering for cosine embedding-based cell segmentation and tracking
Mengyang Zhao, Aadarsh Jha, Quan Liu +6
Recently, single-stage embedding based deep learning algorithms gain increasing attention in cell segmentation and tracking. Compared with the traditional "segment-then-associate"…
Map3D: Registration Based Multi-Object Tracking on 3D Serial Whole Slide Images
Ruining Deng, Haichun Yang, Aadarsh Jha +4
There has been a long pursuit for precise and reproducible glomerular quantification on renal pathology to leverage both research and practice. When digitizing the biopsy tissue sa…