activity
20172024
most citedEarly-detection and classification of live bacteria using time-lapse coherent imaging and deep learning

209 citations · 506 across the 7 of their papers we have counts for

collaborators

7 papers

q-bio.QM2024★ 21 cited

Virtual Gram staining of label-free bacteria using darkfield microscopy and deep learning

Cagatay Isil, Hatice Ceylan Koydemir, Merve Eryilmaz +8

Gram staining has been one of the most frequently used staining protocols in microbiology for over a century, utilized across various fields, including diagnostics, food safety, an…

eess.IV2023

DUBLINE: A Deep Unfolding Network for B-line Detection in Lung Ultrasound Images

Tianqi Yang, Nantheera Anantrasirichai, Oktay Karakuş +3

In the context of lung ultrasound, the detection of B-lines, which are indicative of interstitial lung disease and pulmonary edema, plays a pivotal role in clinical diagnosis. Curr…

physics.ins-det2022★ 56 cited

Rapid and stain-free quantification of viral plaque via lens-free holography and deep learning

Tairan Liu, Yuzhu Li, Hatice Ceylan Koydemir +8

We present a rapid and stain-free quantitative viral plaque assay using lensfree holographic imaging and deep learning. This cost-effective, compact, and automated device significa…

physics.ins-det2022★ 29 cited

Deep Learning-enabled Detection and Classification of Bacterial Colonies using a Thin Film Transistor (TFT) Image Sensor

Yuzhu Li, Tairan Liu, Hatice Ceylan Koydemir +9

Early detection and identification of pathogenic bacteria such as Escherichia coli (E. coli) is an essential task for public health. The conventional culture-based methods for bact…

eess.IV2020★ 27 cited

Label-free detection of Giardia lamblia cysts using a deep learning-enabled portable imaging flow cytometer

Zoltan Gorocs, David Baum, Fang Song +8

We report a field-portable and cost-effective imaging flow cytometer that uses deep learning to accurately detect Giardia lamblia cysts in water samples at a volumetric throughput…

physics.ins-det2020★ 209 cited

Early-detection and classification of live bacteria using time-lapse coherent imaging and deep learning

Hongda Wang, Hatice Ceylan Koydemir, Yunzhe Qiu +8

We present a computational live bacteria detection system that periodically captures coherent microscopy images of bacterial growth inside a 60 mm diameter agar-plate and analyzes…

cs.LG2017★ 164 cited

Deep learning enhanced mobile-phone microscopy

Yair Rivenson, Hatice Ceylan Koydemir, Hongda Wang +8

Mobile-phones have facilitated the creation of field-portable, cost-effective imaging and sensing technologies that approach laboratory-grade instrument performance. However, the o…