activity
20172024
most citedT cell receptor binding prediction: A machine learning revolution

27 citations · 46 across the 8 of their papers we have counts for

collaborators

11 papers

cs.LG2024

Unlearning Information Bottleneck: Machine Unlearning of Systematic Patterns and Biases

Ling Han, Hao Huang, Dustin Scheinost +2

Effective adaptation to distribution shifts in training data is pivotal for sustaining robustness in neural networks, especially when removing specific biases or outdated informati…

q-bio.QM2023★ 27 cited

T cell receptor binding prediction: A machine learning revolution

Anna Weber, Aurélien Pélissier, María Rodríguez Martínez

Recent advancements in immune sequencing and experimental techniques are generating extensive T cell receptor (TCR) repertoire data, enabling the development of models to predict T…

cs.LG2023★ 1 cited

Conformal Autoregressive Generation: Beam Search with Coverage Guarantees

Nicolas Deutschmann, Marvin Alberts, María Rodríguez Martínez

We introduce two new extensions to the beam search algorithm based on conformal predictions (CP) to produce sets of sequences with theoretical coverage guarantees. The first method…

q-bio.QM2022★ 1 cited

Attention-based Interpretable Regression of Gene Expression in Histology

Mara Graziani, Niccolò Marini, Nicolas Deutschmann +3

Interpretability of deep learning is widely used to evaluate the reliability of medical imaging models and reduce the risks of inaccurate patient recommendations. For models exceed…

cs.LG2022★ 1 cited

Is Attention Interpretation? A Quantitative Assessment On Sets

Jonathan Haab, Nicolas Deutschmann, Maria Rodríguez Martínez

The debate around the interpretability of attention mechanisms is centered on whether attention scores can be used as a proxy for the relative amounts of signal carried by sub-comp…

q-bio.BM2021

TITAN: T Cell Receptor Specificity Prediction with Bimodal Attention Networks

Anna Weber, Jannis Born, María Rodríguez Martínez

Motivation: The activity of the adaptive immune system is governed by T-cells and their specific T-cell receptors (TCR), which selectively recognize foreign antigens. Recent advanc…