32 citations · 64 across the 7 of their papers we have counts for
9 papers
On the Design of an Analog-Dyadic Converter CRN
Mathieu Hemery
The Chemical Reaction Networks (CRN) interpreted through the differential semantics, even when restricted to elementary reactions with mass action law kinetics, form a Turing-compl…
On a model of online analog computation in the cell with absolute functional robustness: algebraic characterization, function compiler and error control
Mathieu Hemery, François Fages
The Turing completeness of continuous Chemical Reaction Networks (CRNs) states that any computable real function can be computed by a continuous CRN on a finite set of molecular sp…
On Estimating Derivatives of Input Signals in Biochemistry
Mathieu Hemery, François Fages
The online estimation of the derivative of an input signal is widespread in control theory and engineering. In the realm of chemical reaction networks (CRN), this raises however a…
Algebraic Biochemistry: a Framework for Analog Online Computation in Cells
Mathieu Hemery, François Fages
The Turing completeness of continuous chemical reaction networks (CRNs) states that any computable real function can be computed by a continuous CRN on a finite set of molecular sp…
Compiling Elementary Mathematical Functions into Finite Chemical Reaction Networks via a Polynomialization Algorithm for ODEs
Mathieu Hemery, François Fages, Sylvain Soliman
The Turing completeness result for continuous chemical reaction networks (CRN) shows that any computable function over the real numbers can be computed by a CRN over a finite set o…
On the Complexity of Quadratization for Polynomial Differential Equations
Mathieu Hemery, François Fages, Sylvain Soliman
Chemical reaction networks (CRNs) are a standard formalism used in chemistry and biology to reason about the dynamics of molecular interaction networks. In their interpretation by…
Phenotypic spandrel: absolute discrimination and ligand antagonism
Paul François, Mathieu Hemery, Kyle A. Johnson +1
We consider the general problem of sensitive and specific discrimination between biochemical species. An important instance is immune discrimination between self and not-self, wher…
Local Algorithms for Graphs
David Gamarnik, Mathieu Hemery, Samuel Hetterich
We are going to analyze local algorithms over sparse random graphs. These algorithms are based on local information where local regards to a decision made by the exploration of a s…
Evolution of sparsity and modularity in a model of protein allostery
Mathieu Hemery, Olivier Rivoire
The sequence of a protein is not only constrained by its physical and biochemical properties under current selection, but also by features of its past evolutionary history. Underst…