59 citations · 278 across the 18 of their papers we have counts for
3 papers · 1 filter
A Systematic Study of Joint Representation Learning on Protein Sequences and Structures
Zuobai Zhang, Chuanrui Wang, Minghao Xu +4
Learning effective protein representations is critical in a variety of tasks in biology such as predicting protein functions. Recent sequence representation learning methods based…
Pre-Training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction
Zuobai Zhang, Minghao Xu, Aurélie Lozano +3
Self-supervised pre-training methods on proteins have recently gained attention, with most approaches focusing on either protein sequences or structures, neglecting the exploration…
ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts
Minghao Xu, Xinyu Yuan, Santiago Miret +1
Current protein language models (PLMs) learn protein representations mainly based on their sequences, thereby well capturing co-evolutionary information, but they are unable to exp…