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cs.LG2025
Continuously Tempered Diffusion Samplers
Ezra Erives, Bowen Jing, Peter Holderrieth +1
Annealing-based neural samplers seek to amortize sampling from unnormalized distributions by training neural networks to transport a family of densities interpolating from source t…
q-bio.BM2025
ProtComposer: Compositional Protein Structure Generation with 3D Ellipsoids
Hannes Stark, Bowen Jing, Tomas Geffner +4
We develop ProtComposer to generate protein structures conditioned on spatial protein layouts that are specified via a set of 3D ellipsoids capturing substructure shapes and semant…