activity
20132023
most citedTMB: Automatic Differentiation and Laplace Approximation

928 citations · 963 across the 9 of their papers we have counts for

collaborators

11 papers

stat.ME2023

Exploring the likelihood surface in multivariate Gaussian mixtures using Hamiltonian Monte Carlo

Francesca Azzolini, Hans Skaug

Multimodality of the likelihood in Gaussian mixtures is a well-known problem. The choice of the initial parameter vector for the numerical optimizer may affect whether the optimize…

cs.LG2021

A Comparison of the Delta Method and the Bootstrap in Deep Learning Classification

Geir K. Nilsen, Antonella Z. Munthe-Kaas, Hans J. Skaug +1

We validate the recently introduced deep learning classification adapted Delta method by a comparison with the classical Bootstrap. We show that there is a strong linear relationsh…

stat.ME2020★ 3 cited

An information criterion for automatic gradient tree boosting

Berent Ånund Strømnes Lunde, Tore Selland Kleppe, Hans Julius Skaug

An information theoretic approach to learning the complexity of classification and regression trees and the number of trees in gradient tree boosting is proposed. The optimism (tes…

stat.AP2020★ 1 cited

Heritability curves: a local measure of heritability

Geir D. Berentsen, Francesca Azzolini, Hans J. Skaug +2

This paper introduces a new measure of heritability which relaxes the classical assumption that the degree of heritability of a continuous trait can be summarized by a single numbe…

cs.LG2019

Epistemic Uncertainty Quantification in Deep Learning Classification by the Delta Method

Geir K. Nilsen, Antonella Z. Munthe-Kaas, Hans J. Skaug +1

The Delta method is a classical procedure for quantifying epistemic uncertainty in statistical models, but its direct application to deep neural networks is prevented by the large…

cs.LG2019★ 7 cited

Efficient Computation of Hessian Matrices in TensorFlow

Geir K. Nilsen, Antonella Z. Munthe-Kaas, Hans J. Skaug +1

The Hessian matrix has a number of important applications in a variety of different fields, such as optimzation, image processing and statistics. In this paper we focus on the prac…

stat.CO2018★ 1 cited

Saddlepoint-adjusted inversion of characteristic functions

Berent Å. S. Lunde, Tore S. Kleppe, Hans J. Skaug

For certain types of statistical models, the characteristic function (Fourier transform) is available in closed form, whereas the probability density function has an intractable fo…

q-bio.GN2018★ 21 cited

Whole genome resequencing reveals diagnostic markers for investigating global migration and hybridization between minke whale species

Ketil Malde, Bjørghild B. Seliussen, María Quintela +11

Background: In the marine environment, where there are few absolute physical barriers, contemporary contact between previously isolated species can occur across great distances, an…

stat.CO2016★ 2 cited

On the application of higher order symplectic integrators in Hamiltonian Monte Carlo

Janne Mannseth, Tore Selland Kleppe, Hans J. Skaug

We explore the construction of new symplectic numerical integration schemes to be used in Hamiltonian Monte Carlo and study their efficiency. Two integration schemes from Blanes et…

stat.CO2015★ 928 cited

TMB: Automatic Differentiation and Laplace Approximation

Kasper Kristensen, Anders Nielsen, Casper W. Berg +2

TMB is an open source R package that enables quick implementation of complex nonlinear random effect (latent variable) models in a manner similar to the established AD Model Builde…

stat.CO2013

Bandwidth Selection In Pre-Smoothed Particle Filters

Tore Selland Kleppe, Hans Julius Skaug

For the purpose of maximum likelihood estimation of static parameters, we apply a kernel smoother to the particles in the standard SIR filter for non-linear state space models with…