52 citations · 140 across the 9 of their papers we have counts for
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Bugs as Features (Part II): A Perspective on Enriching Microbiome-Gut-Brain Axis Analyses
Thomaz F. S. Bastiaanssen, Thomas P. Quinn, Amy Loughman
The microbiome-gut-brain-axis field is multidisciplinary, benefiting from the expertise of microbiology, ecology, psychiatry, computational biology, and epidemiology amongst other…
Bugs as Features (Part I): Concepts and Foundations for the Compositional Data Analysis of the Microbiome-Gut-Brain Axis
Thomaz F. S. Bastiaanssen, Thomas P. Quinn, Amy Loughman
There has been a growing acknowledgement of the involvement of the gut microbiome - the collection of microbes that reside in our gut - in regulating our mood and behaviour. This p…
Stool Studies Don't Pass the Sniff Test: A Systematic Review of Human Gut Microbiome Research Suggests Widespread Misuse of Machine Learning
Thomas P. Quinn
In the machine learning culture, an independent test set is required for proper model verification. Failures in model verification, including test set omission and test set leakage…