20 citations · 103 across the 37 of their papers we have counts for
5 papers · 1 filter
scCluBench: Comprehensive Benchmarking of Clustering Algorithms for Single-Cell RNA Sequencing
Ping Xu, Zaitian Wang, Zhirui Wang +5
Cell clustering is crucial for uncovering cellular heterogeneity in single-cell RNA sequencing (scRNA-seq) data by identifying cell types and marker genes. Despite its importance,…
scUnified: An AI-Ready Standardized Resource for Single-Cell RNA Sequencing Analysis
Ping Xu, Zaitian Wang, Zhirui Wang +7
Single-cell RNA sequencing (scRNA-seq) technology enables systematic delineation of cellular states and interactions, providing crucial insights into cellular heterogeneity. Buildi…
scSiameseClu: A Siamese Clustering Framework for Interpreting single-cell RNA Sequencing Data
Ping Xu, Zhiyuan Ning, Pengjiang Li +5
Single-cell RNA sequencing (scRNA-seq) reveals cell heterogeneity, with cell clustering playing a key role in identifying cell types and marker genes. Recent advances, especially g…
Knowledge-Guided Biomarker Identification for Label-Free Single-Cell RNA-Seq Data: A Reinforcement Learning Perspective
Meng Xiao, Weiliang Zhang, Xiaohan Huang +4
Gene panel selection aims to identify the most informative genomic biomarkers in label-free genomic datasets. Traditional approaches, which rely on domain expertise, embedded machi…
scInterpreter: Training Large Language Models to Interpret scRNA-seq Data for Cell Type Annotation
Cong Li, Meng Xiao, Pengfei Wang +3
Despite the inherent limitations of existing Large Language Models in directly reading and interpreting single-cell omics data, they demonstrate significant potential and flexibili…