activity
20182023
most citedA Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology

271 citations · 535 across the 37 of their papers we have counts for

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11 papers · 1 filter

cs.CV2022★ 1 cited

A Study of Demographic Bias in CNN-based Brain MR Segmentation

Stefanos Ioannou, Hana Chockler, Alexander Hammers +1

Convolutional neural networks (CNNs) are increasingly being used to automate the segmentation of brain structures in magnetic resonance (MR) images for research studies. In other a…

cs.CV2021

Fairness in Cardiac MR Image Analysis: An Investigation of Bias Due to Data Imbalance in Deep Learning Based Segmentation

Esther Puyol-Anton, Bram Ruijsink, Stefan K. Piechnik +4

The subject of "fairness" in artificial intelligence (AI) refers to assessing AI algorithms for potential bias based on demographic characteristics such as race and gender, and the…

cs.CV2020

Probabilistic 3D surface reconstruction from sparse MRI information

Katarína Tóthová, Sarah Parisot, Matthew Lee +4

Surface reconstruction from magnetic resonance (MR) imaging data is indispensable in medical image analysis and clinical research. A reliable and effective reconstruction tool shou…

cs.CV2019★ 271 cited

A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology

James R. Clough, Nicholas Byrne, Ilkay Oksuz +3

We introduce a method for training neural networks to perform image or volume segmentation in which prior knowledge about the topology of the segmented object can be explicitly pro…

cs.CV2019★ 1 cited

Explicit topological priors for deep-learning based image segmentation using persistent homology

James R. Clough, Ilkay Oksuz, Nicholas Byrne +2

We present a novel method to explicitly incorporate topological prior knowledge into deep learning based segmentation, which is, to our knowledge, the first work to do so. Our meth…

cs.CV2018

Magnetic Resonance Fingerprinting using Recurrent Neural Networks

Ilkay Oksuz, Gastao Cruz, James Clough +6

Magnetic Resonance Fingerprinting (MRF) is a new approach to quantitative magnetic resonance imaging that allows simultaneous measurement of multiple tissue properties in a single,…

cs.CV2018

Automatic CNN-based detection of cardiac MR motion artefacts using k-space data augmentation and curriculum learning

Ilkay Oksuz, Bram Ruijsink, Esther Puyol-Anton +8

Good quality of medical images is a prerequisite for the success of subsequent image analysis pipelines. Quality assessment of medical images is therefore an essential activity and…

cs.CV2018★ 4 cited

Deep Learning using K-space Based Data Augmentation for Automated Cardiac MR Motion Artefact Detection

Ilkay Oksuz, Bram Ruijsink, Esther Puyol-Anton +6

Quality assessment of medical images is essential for complete automation of image processing pipelines. For large population studies such as the UK Biobank, artefacts such as thos…

cs.CV2018

Uncertainty Quantification in CNN-Based Surface Prediction Using Shape Priors

Katarína Tóthová, Sarah Parisot, Matthew C. H. Lee +5

Surface reconstruction is a vital tool in a wide range of areas of medical image analysis and clinical research. Despite the fact that many methods have proposed solutions to the r…

cs.CV2018

Learning associations between clinical information and motion-based descriptors using a large scale MR-derived cardiac motion atlas

Esther Puyol-Anton, Bram Ruijsink, Helene Langet +4

The availability of large scale databases containing imaging and non-imaging data, such as the UK Biobank, represents an opportunity to improve our understanding of healthy and dis…

cs.CV2018

Human-level Performance On Automatic Head Biometrics In Fetal Ultrasound Using Fully Convolutional Neural Networks

Matthew Sinclair, Christian F. Baumgartner, Jacqueline Matthew +9

Measurement of head biometrics from fetal ultrasonography images is of key importance in monitoring the healthy development of fetuses. However, the accurate measurement of relevan…