14 citations · 14 across the 2 of their papers we have counts for
3 papers
AnySeq/GPU: A Novel Approach for Faster Sequence Alignment on GPUs
André Müller, Bertil Schmidt, Richard Membarth +2
In recent years, the rapidly increasing number of reads produced by next-generation sequencing (NGS) technologies has driven the demand for efficient implementations of sequence al…
tinyMD: A Portable and Scalable Implementation for Pairwise Interactions Simulations
Rafael Ravedutti L. Machado, Jonas Schmitt, Sebastian Eibl +6
This paper investigates the suitability of the AnyDSL partial evaluation framework to implement tinyMD: an efficient, scalable, and portable simulation of pairwise interactions amo…
AnyHLS: High-Level Synthesis with Partial Evaluation
M. Akif Özkan, Arsène Pérard-Gayot, Richard Membarth +5
FPGAs excel in low power and high throughput computations, but they are challenging to program. Traditionally, developers rely on hardware description languages like Verilog or VHD…