activity
20022023
most citedRobust protein-protein interactions in crowded cellular environments

83 citations · 315 across the 10 of their papers we have counts for

collaborators

10 papers

cs.CY2023

NSF RESUME HPC Workshop: High-Performance Computing and Large-Scale Data Management in Service of Epidemiological Modeling

Abby Stevens, Jonathan Ozik, Kyle Chard +2

The NSF-funded Robust Epidemic Surveillance and Modeling (RESUME) project successfully convened a workshop entitled "High-performance computing and large-scale data management in s…

q-bio.PE2020

Identifying the measurements required to estimate rates of COVID-19 transmission, infection, and detection, using variational data assimilation

Eve Armstrong, Manuela Runge, Jaline Gerardin

We demonstrate the ability of statistical data assimilation to identify the measurements required for accurate state and parameter estimation in an epidemiological model for the no…

q-bio.PE2016★ 37 cited

Malaria elimination campaigns in the Lake Kariba region of Zambia: a spatial dynamical model

Milen Nikolov, Caitlin A. Bever, Alexander Upfill-Brown +5

Background As more regions approach malaria elimination, understanding how different interventions interact to reduce transmission becomes critical. The Lake Kariba area of Souther…

q-bio.PE2015★ 47 cited

Optimal population-level infection detection strategies for malaria control and elimination in a spatial model of malaria transmission

Jaline Gerardin, Caitlin A. Bever, Busiku Hamainza +3

Mass campaigns with antimalarial drugs are potentially a powerful tool for local elimination of malaria, yet current diagnostic technologies are insufficiently sensitive to identif…

q-bio.PE2015★ 67 cited

Mass campaigns with antimalarial drugs: a modelling comparison of artemether-lumefantrine and DHA-piperaquine with and without primaquine as tools for malaria control and elimination

Jaline Gerardin, Philip Eckhoff, Edward A. Wenger

Antimalarial drugs are a powerful tool for malaria control and elimination. Artemisinin-based combination therapies (ACTs) can reduce transmission when widely distributed in a camp…

q-bio.PE2015★ 47 cited

Characterization of the infectious reservoir of malaria with an agent-based model calibrated to age-stratified parasite densities and infectiousness

Jaline Gerardin, Andre Lin Ouedraogo, Kevin A. McCarthy +3

Background Elimination of malaria can only be achieved through removal of all vectors or complete depletion of the infectious reservoir in humans. Mechanistic models can be built t…