3 papers
q-bio.QM2020
PEtab -- interoperable specification of parameter estimation problems in systems biology
Leonard Schmiester, Yannik Schälte, Frank T. Bergmann +26
Reproducibility and reusability of the results of data-based modeling studies are essential. Yet, there has been -- so far -- no broadly supported format for the specification of p…
q-bio.QM2019
Mathematical modeling of variability in intracellular signaling
Carolin Loos, Jan Hasenauer
Cellular signaling is essential in information processing and decision making. Therefore, a variety of experimental approaches have been developed to study signaling on bulk and si…
q-bio.QM2017
Scalable Inference of Ordinary Differential Equation Models of Biochemical Processes
Fabian Fröhlich, Carolin Loos, Jan Hasenauer
Ordinary differential equation models have become a standard tool for the mechanistic description of biochemical processes. If parameters are inferred from experimental data, such…