6 citations · 9 across the 6 of their papers we have counts for
5 papers · 1 filter
AC-DC: Amplification Curve Diagnostics for Covid-19 Group Testing
Ryan Gabrys, Srilakshmi Pattabiraman, Vishal Rana +4
The first part of the paper presents a review of the gold-standard testing protocol for Covid-19, real-time, reverse transcriptase PCR, and its properties and associated measuremen…
Reconstructing Mixtures of Coded Strings from Prefix and Suffix Compositions
Ryan Gabrys, Srilakshmi Pattabiraman, Olgica Milenkovic
The problem of string reconstruction from substring information has found many applications due to its relevance in DNA- and polymer-based data storage. One practically important a…
Coding for Polymer-Based Data Storage
Srilakshmi Pattabiraman, Ryan Gabrys, Olgica Milenkovic
Motivated by polymer-based data-storage platforms that use chains of binary synthetic polymers as the recording media and read the content via tandem mass spectrometers, we propose…
Mass Error-Correction Codes for Polymer-Based Data Storage
Ryan Gabrys, Srilakshmi Pattabiraman, Olgica Milenkovic
We consider the problem of correcting mass readout errors in information encoded in binary polymer strings. Our work builds on results for string reconstruction problems using comp…
Group Testing with Runlength Constraints for Topological Molecular Storage
Abhishek Agarwal, Olgica Milenkovic, Srilakshmi Pattabiraman +1
Motivated by applications in topological DNA-based data storage, we introduce and study a novel setting of Non-Adaptive Group Testing (NAGT) with runlength constraints on the colum…