2 papers
q-bio.QM2025
A graph-based approach for modification site assignment in proteomics
Dafni Skiadopoulou, Lukas Käll, Harald Barsnes +2
Background In proteomics, the most probable localizations of post-translational modifications are assessed by localization scores evaluating the likelihood of a given modification…
q-bio.GN2025
ProHap Explorer: Visualizing Haplotypes in Proteogenomic Datasets
Jakub VaÅ¡ÃÄek, Dafni Skiadopoulou, Ksenia G. Kuznetsova +3
In mass spectrometry-based proteomics, experts usually project data onto a single set of reference sequences, overlooking the influence of common haplotypes (combinations of geneti…