78 citations · 806 across the 54 of their papers we have counts for
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Determining the DNA stability parameters for the breathing dynamics of heterogeneous DNA by stochastic optimization
Srijeeta Talukder, Pinaki Chaudhury, Ralf Metzler +1
We suggest that the thermodynamic stability parameters (nearest neighbor stacking and hydrogen bonding free energies) of double-stranded DNA molecules can be inferred reliably from…
Positive feedback and temperature mediated molecular switch controls differential gene regulation in Bordetella pertussis
Arnab Bandyopadhyay, Suman K. Banik
Based on the phosphorelay kinetics operative within BvgAS two component system we propose a mathematical framework for signal transduction and gene regulation of phenotypic phases…
Computational modeling of differences in the quorum sensing induced luminescence phenotypes of \textit{Vibrio harveyi} and \textit{Vibrio cholerae}
Andrew T Fenley, Suman K Banik, Rahul V Kulkarni
\textit{Vibrio harveyi} and \textit{Vibrio cholerae} have quorum sensing pathways with similar design and highly homologous components including multiple small RNAs (sRNAs). Howeve…