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math.CO2019★ 3 cited
Split Network Polytopes and Network Spaces
Satyan Devadoss, Cassandra Durell, Stefan Forcey
Phylogenetics begins with reconstructing biological family trees from genetic data. Since Nature is not limited to tree-like histories, we use networks to organize our data, and ha…
math.CO2019
Level-1 Phylogenetic Networks and their Balanced Minimum Evolution Polytopes
Cassandra Durell, Stefan Forcey
Balanced minimum evolution is a distance-based criterion for the reconstruction of phylogenetic trees. Several algorithms exist to find the optimal tree with respect to this criter…