activity
20182024
most citedHEROHE Challenge: assessing HER2 status in breast cancer without immunohistochemistry or in situ hybridization

53 citations · 95 across the 6 of their papers we have counts for

collaborators

8 papers

cs.CV2024

B-Cos Aligned Transformers Learn Human-Interpretable Features

Manuel Tran, Amal Lahiani, Yashin Dicente Cid +7

Vision Transformers (ViTs) and Swin Transformers (Swin) are currently state-of-the-art in computational pathology. However, domain experts are still reluctant to use these models d…

cs.AI2023

Training Transitive and Commutative Multimodal Transformers with LoReTTa

Manuel Tran, Yashin Dicente Cid, Amal Lahiani +3

Training multimodal foundation models is challenging due to the limited availability of multimodal datasets. While many public datasets pair images with text, few combine images wi…

q-bio.QM2021★ 53 cited

HEROHE Challenge: assessing HER2 status in breast cancer without immunohistochemistry or in situ hybridization

Eduardo Conde-Sousa, João Vale, Ming Feng +15

Breast cancer is the most common malignancy in women, being responsible for more than half a million deaths every year. As such, early and accurate diagnosis is of paramount import…

cs.CV2020

Certainty Pooling for Multiple Instance Learning

Jacob Gildenblat, Ido Ben-Shaul, Zvi Lapp +1

Multiple Instance Learning is a form of weakly supervised learning in which the data is arranged in sets of instances called bags with one label assigned per bag. The bag level cla…

cs.CV2019

Perceptual Embedding Consistency for Seamless Reconstruction of Tilewise Style Transfer

Amal Lahiani, Nassir Navab, Shadi Albarqouni +1

Style transfer is a field with growing interest and use cases in deep learning. Recent work has shown Generative Adversarial Networks(GANs) can be used to create realistic images o…

cs.CV2019★ 32 cited

Self-Supervised Similarity Learning for Digital Pathology

Jacob Gildenblat, Eldad Klaiman

Using features extracted from networks pretrained on ImageNet is a common practice in applications of deep learning for digital pathology. However it presents the downside of missi…

cs.CV2018

Virtualization of tissue staining in digital pathology using an unsupervised deep learning approach

Amal Lahiani, Jacob Gildenblat, Irina Klaman +3

Histopathological evaluation of tissue samples is a key practice in patient diagnosis and drug development, especially in oncology. Historically, Hematoxylin and Eosin (H&E) has be…

cs.CV2018★ 10 cited

Generalizing multistain immunohistochemistry tissue segmentation using one-shot color deconvolution deep neural networks

Amal Lahiani, Jacob Gildenblat, Irina Klaman +2

A key challenge in cancer immunotherapy biomarker research is quantification of pattern changes in microscopic whole slide images of tumor biopsies. Different cell types tend to mi…