8 citations · 14 across the 6 of their papers we have counts for
6 papers
Genes Preferring Non-AUG Start Codons in Bacteria
Anne Gvozdjak, Manoj P. Samanta
Here we investigate translational regulation in bacteria by analyzing the distribution of start codons in fully assembled genomes. We report 36 genes (infC, rpoC, rnpA, etc.) showi…
Ultraconserved Sequences in the Honeybee Genome - Are GC-rich Regions Preferred?
Manoj Pratim Samanta
Among all insect genomes, honeybee displays one of the most unusual patterns with interspersed long AT and GC-rich segments. Nearly 75% of the protein-coding genes are located in t…
Nucleotide Distribution Patterns in Insect Genomes
Manoj Pratim Samanta
This work analyzed genome-wide nucleotide distribution patterns in ten insect genomes. Two internal measures were applied: (i) GC variation and (ii) third codon nucleotide preferen…
Global Snapshot of Protein Interaction Network -- A Percolation Based Approach
Chen-Shan Chin, Manoj Pratim Samanta
In this paper, we study the large-scale protein interaction network of yeast uti lizing a stochastic method based upon percolation of random graphs. In order to find the global fea…
Redundancies in Large-scale Protein Interaction Networks
Manoj Pratim Samanta, Shoudan Liang
Understanding functional associations among genes discovered in sequencing projects is a key issue in post-genomic biology. However, reliable interpretation of the protein interact…
Josephson Effect in Unconventional Superconductors
Supriyo Datta, Manoj P. Samanta
In this letter we present a simple relation, that allows one to predict the Josephson current between two unconventional superconductors with arbitrary band-structure and pairing s…