209 citations · 367 across the 10 of their papers we have counts for
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q-bio.BM2007★ 24 cited
Annealed importance sampling of dileucine peptide
Edward Lyman, Daniel M. Zuckerman
Annealed importance sampling is a means to assign equilibrium weights to a nonequilibrium sample that was generated by a simulated annealing protocol. The weights may then be used…
q-bio.BM2005★ 209 cited
Resolution exchange simulation
Edward Lyman, F. Marty Ytreberg, Daniel M. Zuckerman
We extend replica exchange simulation in two ways, and apply our approaches to biomolecules. The first generalization permits exchange simulation between models of differing resolu…