155 citations · 221 across the 10 of their papers we have counts for
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q-bio.QM2016★ 1 cited
Estimating transmission from genetic and epidemiological data: a metric to compare transmission trees
Michelle Kendall, Diepreye Ayabina, Caroline Colijn
Reconstructing who infected whom is a central challenge in analysing epidemiological data. Recently, advances in sequencing technology have led to increasing interest in Bayesian a…
q-bio.QM2015
Asymptotic frequency of shapes in supercritical branching trees
Giacomo Plazzotta, Caroline Colijn
The shapes of branching trees have been linked to disease transmission patterns. In this paper we use the general Crump-Mode-Jagers branching process to model an outbreak of an inf…