activity
20112023
most citedSparse and compositionally robust inference of microbial ecological networks

2k citations · 2k across the 10 of their papers we have counts for

collaborators

10 papers

cs.LG2023★ 2 cited

Smoothing the Edges: Smooth Optimization for Sparse Regularization using Hadamard Overparametrization

Chris Kolb, Christian L. Müller, Bernd Bischl +1

We present a framework for smooth optimization of explicitly regularized objectives for (structured) sparsity. These non-smooth and possibly non-convex problems typically rely on s…

stat.CO2021★ 1 cited

GGLasso -- a Python package for General Graphical Lasso computation

Fabian Schaipp, Christian L. Müller, Oleg Vlasovets

We introduce GGLasso, a Python package for solving General Graphical Lasso problems. The Graphical Lasso scheme, introduced by (Friedman 2007) (see also (Yuan 2007; Banerjee 2008))…

cs.LG2021

Inverse-Dirichlet Weighting Enables Reliable Training of Physics Informed Neural Networks

Suryanarayana Maddu, Dominik Sturm, Christian L. Müller +1

We characterize and remedy a failure mode that may arise from multi-scale dynamics with scale imbalances during training of deep neural networks, such as Physics Informed Neural Ne…

stat.ML2021★ 7 cited

deepregression: a Flexible Neural Network Framework for Semi-Structured Deep Distributional Regression

David Rügamer, Chris Kolb, Cornelius Fritz +11

In this paper we describe the implementation of semi-structured deep distributional regression, a flexible framework to learn conditional distributions based on the combination of…

math.NA2021★ 3 cited

STENCIL-NET: Data-driven solution-adaptive discretization of partial differential equations

Suryanarayana Maddu, Dominik Sturm, Bevan L. Cheeseman +2

Numerical methods for approximately solving partial differential equations (PDE) are at the core of scientific computing. Often, this requires high-resolution or adaptive discretiz…

cs.LG2020★ 26 cited

Learning physically consistent mathematical models from data using group sparsity

Suryanarayana Maddu, Bevan L. Cheeseman, Christian L. Müller +1

We propose a statistical learning framework based on group-sparse regression that can be used to 1) enforce conservation laws, 2) ensure model equivalence, and 3) guarantee symmetr…

math.NA2019★ 15 cited

Stability selection enables robust learning of partial differential equations from limited noisy data

Suryanarayana Maddu, Bevan L. Cheeseman, Ivo F. Sbalzarini +1

We present a statistical learning framework for robust identification of partial differential equations from noisy spatiotemporal data. Extending previous sparse regression approac…

stat.ML2014★ 1 cited

Topology Adaptive Graph Estimation in High Dimensions

Johannes Lederer, Christian Müller

We introduce Graphical TREX (GTREX), a novel method for graph estimation in high-dimensional Gaussian graphical models. By conducting neighborhood selection with TREX, GTREX avoids…

stat.AP2014★ 2k cited

Sparse and compositionally robust inference of microbial ecological networks

Zachary D. Kurtz, Christian L. Mueller, Emily R. Miraldi +3

16S-ribosomal sequencing and other metagonomic techniques provide snapshots of microbial communities, revealing phylogeny and the abundances of microbial populations across diverse…

q-bio.MN2011★ 1 cited

Global parameter identification of stochastic reaction networks from single trajectories

Christian L. Muller, Rajesh Ramaswamy, Ivo F. Sbalzarini

We consider the problem of inferring the unknown parameters of a stochastic biochemical network model from a single measured time-course of the concentration of some of the involve…